Mm01348781_m1

• Gene Symbol: Clcn3
• Gene Name: chloride channel 3
• Gene Aliases: Clc3
• Chromosome Location: Chr.8: 60910389 - 60983311 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clcn3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_007711.3	NP_031737.1	10 - 11	2520		78
	NM_173873.1	NP_776298.1	11 - 12	2696		78
	NM_173874.1	NP_776299.1	11 - 12	2696		78
	NM_173876.3	NP_776301.1	10 - 11	2241		78
GenBank mRNA	AF029347.1	-	10 - 11	2144		78
	AK141136.1	-	11 - 12	2634		78
	AK147364.1	-	9 - 10	6719		78
	AK147548.1	-	9 - 10	6721		78
	AK147621.1	-	9 - 10	6721		78
	AK150688.1	-	11 - 12	2625		78
	AK159698.1	-	11 - 12	2670		78
	AK161327.1	-	11 - 12	2624		78
	AK162639.1	-	11 - 12	2637		78
	AK169297.1	-	11 - 12	2617		78
	BC057133.1	-	10 - 11	2174	6833732	78
	X78874.1	-	10 - 11	2345		78

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0800002290.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Ion Channel, 3' Most, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Clcn3

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

transport
ion transport
chloride transport
phagocytosis, engulfment
adult locomotory behavior
regulation of ion transmembrane transport
synaptic transmission, glutamatergic
regulation of anion transport
photoreceptor cell maintenance
negative regulation of cell volume
synaptic transmission, GABAergic
transmembrane transport
neuron cellular homeostasis
synaptic vesicle lumen acidification
chloride transmembrane transport
positive regulation of reactive oxygen species biosynthetic process
regulation of anion transmembrane transport

Function(s)

nucleotide binding
ion channel activity
voltage-gated ion channel activity
voltage-gated chloride channel activity
chloride channel activity
ATP binding
antiporter activity
PDZ domain binding
protein heterodimerization activity
volume-sensitive chloride channel activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0800017278.mm.1	NM_173874.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017278.mm.1	NM_173874.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017278.mm.1	TC0800002290.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800017279.mm.1	NM_173874.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017279.mm.1	NM_173874.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017279.mm.1	TC0800002290.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	NM_007711.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	NM_007711.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	NM_173873.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	NM_173873.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	NM_173874.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	NM_173874.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	NM_173876.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	NM_173876.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017280.mm.1	TC0800002290.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	NM_007711.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	NM_007711.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	NM_173873.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	NM_173873.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	NM_173874.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	NM_173874.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	NM_173876.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	NM_173876.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0800017281.mm.1	TC0800002290.mm.1	MTA TC