Mm01350386_g1

• Gene Symbol: Ctnnb1
• Gene Name: catenin (cadherin associated protein), beta 1
• Gene Aliases: Bfc, Catnb, Mesc
• Chromosome Location: Chr.9: 120933400 - 120960507 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ctnnb1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001165902.1	NP_001159374.1	4 - 5	582		72
	NM_007614.3	NP_031640.1	4 - 5	782		72
GenBank mRNA	AK018515.1	-	4 - 5	696		72
	AK020013.1	-	4 - 5	697		72
	AK035311.1	-	4 - 5	695		72
	AK132398.1	-	4 - 5	763		72
	AK133656.1	-	4 - 5	695		72
	AK135743.1	-	1 - 2	249		72
	AY751549.1	-	4 - 5	707		72
	BC043078.1	-	1 - 2	184		72
	BC048153.1	-	4 - 5	707	5709247	72
	BC053065.1	-	4 - 5	707	5709247	72
	M90364.1	-	4 - 5	592		72

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900001612.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctnnb1

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
embryonic axis specification
cell morphogenesis involved in differentiation
skeletal system development
branching involved in blood vessel morphogenesis
vasculogenesis
branching involved in ureteric bud morphogenesis
in utero embryonic development
gastrulation with mouth forming second
endoderm formation
cell fate specification
cell fate determination
endodermal cell fate commitment
neuron migration
kidney development
neural plate development
vasculature development
positive regulation of neuroblast proliferation
positive regulation of mesenchymal cell proliferation
lens morphogenesis in camera-type eye
ventricular compact myocardium morphogenesis
regulation of secondary heart field cardioblast proliferation
mesenchymal to epithelial transition involved in metanephros morphogenesis
metanephros morphogenesis
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription by RNA polymerase II
cell adhesion
cell-matrix adhesion
chemical synaptic transmission
ectoderm development
nervous system development
glial cell fate determination
heart development
cell population proliferation
positive regulation of cell population proliferation
negative regulation of cell population proliferation
anterior/posterior axis specification
dorsal/ventral axis specification
dorsal/ventral pattern formation
proximal/distal pattern formation
cellular process
regulation of gene expression
positive regulation of gene expression
positive regulation of epithelial to mesenchymal transition
positive regulation of heparan sulfate proteoglycan biosynthetic process
Schwann cell proliferation
Wnt signaling pathway
morphogenesis of embryonic epithelium
stem cell population maintenance
layer formation in cerebral cortex
central nervous system vasculogenesis
hair cycle process
hemopoiesis
cell differentiation
T cell differentiation
osteoclast differentiation
lung development
male genitalia development
regulation of epithelial cell differentiation
positive regulation of epithelial cell differentiation
forebrain development
regulation of centriole-centriole cohesion
pancreas development
hair follicle morphogenesis
regulation of myelination
positive regulation of telomere maintenance via telomerase
negative regulation of chondrocyte differentiation
response to estradiol
T cell differentiation in thymus
negative regulation of protein sumoylation
response to cytokine
adherens junction organization
adherens junction assembly
protein localization to cell surface
cellular protein localization
embryonic heart tube development
genitalia morphogenesis
embryonic forelimb morphogenesis
embryonic hindlimb morphogenesis
embryonic skeletal limb joint morphogenesis
regulation of cell population proliferation
regulation of T cell proliferation
odontogenesis of dentin-containing tooth
regulation of cell fate specification
embryonic digit morphogenesis
regulation of apoptotic process
positive regulation of apoptotic process
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of MAPK cascade
skin development
response to estrogen
canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition
canonical Wnt signaling pathway involved in negative regulation of apoptotic process
bone resorption
regulation of cell differentiation
negative regulation of cell differentiation
positive regulation of endothelial cell differentiation
regulation of osteoblast differentiation
positive regulation of osteoblast differentiation
regulation of osteoclast differentiation
negative regulation of osteoclast differentiation
positive regulation of fibroblast growth factor receptor signaling pathway
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
negative regulation of mitotic cell cycle, embryonic
chromatin-mediated maintenance of transcription
cell maturation
synaptic vesicle transport
animal organ development
thymus development
oocyte development
embryonic foregut morphogenesis
regulation of smooth muscle cell proliferation
negative regulation of oligodendrocyte differentiation
synapse organization
smooth muscle cell differentiation
protein heterooligomerization
positive regulation of telomerase activity
cardiac muscle cell proliferation
oviduct development
canonical Wnt signaling pathway
limb development
trachea morphogenesis
trachea formation
epithelial tube branching involved in lung morphogenesis
lung cell differentiation
lung-associated mesenchyme development
mesenchyme development
lung induction
epithelial cell differentiation involved in prostate gland development
positive regulation of epithelial cell proliferation involved in prostate gland development
hair follicle placode formation
mesenchymal cell proliferation involved in lung development
cardiac vascular smooth muscle cell differentiation
coronary artery morphogenesis
epicardium-derived cardiac vascular smooth muscle cell differentiation
positive regulation of branching involved in lung morphogenesis
endothelial tube morphogenesis
fungiform papilla formation
canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation
sympathetic ganglion development
regulation of centromeric sister chromatid cohesion
cellular response to mechanical stimulus
cellular response to growth factor stimulus
cellular response to organic cyclic compound
cellular response to indole-3-methanol
renal system development
renal vesicle formation
renal inner medulla development
renal outer medulla development
nephron tubule formation
mesenchyme morphogenesis
regulation of nephron tubule epithelial cell differentiation
regulation of calcium ion import
cell-cell adhesion
negative regulation of neuron death
cellular response to insulin-like growth factor stimulus
regulation of protein localization to cell surface
positive regulation of determination of dorsal identity
negative regulation of apoptotic signaling pathway

Function(s)

transcription cis-regulatory region binding
DNA binding
chromatin binding
double-stranded DNA binding
DNA-binding transcription factor activity
transcription coactivator activity
protein binding
protein C-terminus binding
transcription factor binding
enzyme binding
kinase binding
protein phosphatase binding
estrogen receptor binding
ionotropic glutamate receptor binding
transmembrane transporter binding
protein-containing complex binding
alpha-catenin binding
cadherin binding
SMAD binding
nitric-oxide synthase binding
I-SMAD binding
R-SMAD binding
DNA-binding transcription factor binding
euchromatin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0900013459.mm.1	TC0900001612.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900013459.mm.1	NM_001165902.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013459.mm.1	NM_001165902.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013459.mm.1	NM_007614.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013459.mm.1	NM_007614.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013457.mm.1	TC0900001612.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900013457.mm.1	NM_001165902.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013457.mm.1	NM_001165902.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013457.mm.1	NM_007614.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013457.mm.1	NM_007614.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013458.mm.1	TC0900001612.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900013458.mm.1	NM_001165902.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013458.mm.1	NM_001165902.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013458.mm.1	NM_007614.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900013458.mm.1	NM_007614.3	Refseq