Mm01350925_g1

• Gene Symbol: Gm12409
• Gene Name: predicted gene 12409
• Gene Aliases: OTTMUSG00000006726
• Chromosome Location: Chr.4: 45762377 - 45764223 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gm12409
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046068.1		2 - 3	116		62
GenBank mRNA	AK041524.1	-	2 - 3	117		62

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB637831.1	-	2 - 3	113		Chr. 4 - 45762375 - 45764220 [-] on Build GRCm38	62

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	predicted gene 829	Gm829		-38.7kb	Anti-sense	Chr. 4 - 45683589 - 45723706 on NCBI Build GRCm38
Downstream	aldehyde dehydrogenase 1 family, member B1	Aldh1b1	2700007F14Rik	36.0kb	Anti-sense	Chr. 4 - 45799022 - 45804608 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400002585.mm.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Mus musculus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_66_P139615	AK041524.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_66_P139615	AK041524.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P05222958	-	-
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P139615	AK041524.1	mouse_transcriptome
Agilent Six_ChIP_01_of_03_v2	A_68_P03526285	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884900	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884876	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884907	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884918	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884897	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884885	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884881	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884930	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03239741	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03239754	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03239729	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884879	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884945	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884882	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884948	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884899	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884935	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884877	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884883	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884891	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884909	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884932	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884910	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884915	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884894	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884937	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884903	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03593875	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884943	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03239748	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884874	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884947	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03300233	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884922	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884870	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884886	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884949	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884904	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P04049431	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03526274	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884872	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884912	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884905	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03239732	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884901	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22884942	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400021060.mm.1	TC0400002585.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400021060.mm.1	NR_046068.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021060.mm.1	NR_046068.1	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	763788	-	-