Mm01353550_s1

• Gene Symbol: Cldn34c4
• Gene Name: claudin 34C4
• Gene Aliases: 4930412D23Rik
• Chromosome Location: Chr.X: 127721175 - 127736554 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cldn34c4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001281537.1	NP_001268466.1	2	351		66
GenBank mRNA	AK015117.1	-	2	352		66

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BY714663.1	-	2	352		Chr. X - 127721199 - 127736554 [-] on Build GRCm38	66

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	high density lipoprotein (HDL) binding protein pseudogene	4921511C20Rik	Gm383	-325.3kb	Anti-sense	Chr. X - 127394293 - 127395898 on NCBI Build GRCm38
Downstream	predicted gene 4916	Gm4916	EG237030, Rbm31x	653.5kb	Anti-sense	Chr. X - 128375395 - 128377169 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00002955.mm.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Mus musculus, 1700, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P438555	AK015117.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P438555	AK015117.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P438555	AK015117.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_51_P438555	AK015117.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P09413895	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P09413890	-	-
Whole Mouse Genome G4122A	A_51_P438555	AK015117.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P438555	AK015117.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_67_P09413895	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1432477_PM_at	-	-
Mouse Genome 430 2.0 Array	1432477_PM_at	-	-
Mouse Genome 430 2.0 Array	1432477_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	73934_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	73934_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0X00018472.mm.1	TC0X00002955.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00018472.mm.1	NM_001281537.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00018473.mm.1	TC0X00002955.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00018473.mm.1	NM_001281537.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00018475.mm.1	TC0X00002955.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00018475.mm.1	NM_001281537.1	Refseq
Mouse Expression Set 430	1432477_PM_at	-	-
Mouse Expression Set 430	1432477_at	-	-
Affymetrix HT Mouse Genome 430B Array	1432477_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1432477_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	500416	-	-

Array Name	Probe IDs	Targets	Target Type
MouseWG-6 v2 Expression BeadChip	770079	-	-
Illumina mouseRef-8 v1.1 expression beadchip	ILMN_2651848	-	-
Illumina mouse-6 v1.1 expression beadchip	ILMN_2651848	-	-