Mm01746176_g1

• Gene Symbol: Tdg
• Gene Name: thymine DNA glycosylase
• Gene Aliases: E130317C12Rik, JZA-3, Jza1
• Chromosome Location: Chr.10: 82629247 - 82650494 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tdg
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_172552.3	NP_766140.2	1	135		134
GenBank mRNA	BC085471.1	-	1	106	6816716	134

More Information

Additional Information:

This assay is in the 5'UTR region of the BC085471.1, NM_172552.3 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tdg

Panther Classification:

Molecular Function -

DNA metabolism protein, DNA glycosylase, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA repair
base-excision repair
mismatch repair
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
cellular response to DNA damage stimulus
metabolic process
embryo development
chromatin modification
negative regulation of protein binding
negative regulation of chromatin binding
regulation of gene expression, epigenetic
DNA demethylation

Function(s)

RNA polymerase II transcription cofactor activity
double-stranded DNA binding
protein kinase C binding
protein binding
transcription factor binding
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
hydrolase activity
hydrolase activity, acting on glycosyl bonds
hydrolase activity, hydrolyzing N-glycosyl compounds
DNA N-glycosylase activity
protein domain specific binding
mismatched DNA binding
SUMO binding
protein homodimerization activity
structure-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1000007378.mm.1	NM_011561.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007378.mm.1	NM_011561.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007378.mm.1	NM_172552.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007378.mm.1	NM_172552.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007378.mm.1	NR_037190.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007378.mm.1	TC1000000928.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1000007382.mm.1	NM_011561.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007382.mm.1	NM_011561.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007382.mm.1	NM_172552.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007382.mm.1	NM_172552.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007382.mm.1	NR_037190.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007382.mm.1	TC1000000928.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1000007380.mm.1	NM_172552.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007380.mm.1	NM_172552.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1000007380.mm.1	TC1000000928.mm.1	MTA TC