Mm02029975_s1

• Gene Symbol: A930005H10Rik
• Gene Name: RIKEN cDNA A930005H10 gene
• Gene Aliases: -
• Chromosome Location: Chr.3: 115881578 - 115888130 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: A930005H10Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015487.1		1	282		114
	NR_027894.1		1	211		114
	NR_027895.1		1	272		114
GenBank mRNA	AK007373.1	-	1	106		114
	AK020812.1	-	1	283		114
	AK081943.1	-	1	250		114
	AK137339.1	-	1	250		114
	BF019418.1	-	1	211		114

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BY234290.1	-	1	271		Chr. 3 - 115887737 - 115888120 [-] on Build GRCm38	114
GenBankmRNA	BF657927.1	-	1	249		Chr. 3 - 115881661 - 115888097 [-] on Build GRCm38	114
GenBankmRNA	W59576.1	-				Chr. - - [-] on Build	113
GenBankmRNA	BB768725.1	-	1	179		Chr. 3 - 115881583 - 115888028 [-] on Build GRCm38	113
GenBankmRNA	BB628552.1	-	1	245		Chr. 3 - 115887486 - 115888093 [-] on Build GRCm38	114
GenBankmRNA	BB648213.1	-	1	246		Chr. 3 - 115887468 - 115888093 [-] on Build GRCm38	114
GenBankmRNA	BU559269.1	-	1	247		Chr. 3 - 115881612 - 115888092 [-] on Build GRCm38	114
GenBankmRNA	BY622656.1	-	1	70		Chr. 3 - 115881581 - 115887918 [-] on Build GRCm38	114
GenBankmRNA	AA016544.1	-	1			Chr. 3 - 115881733 - 115888006 [-] on Build GRCm38	113
GenBankmRNA	EL962384.1	-	1	255		Chr. 3 - 115881606 - 115888085 [-] on Build GRCm38	114
GenBankmRNA	BU604983.1	-	1	234		Chr. 3 - 115881578 - 115888083 [-] on Build GRCm38	114
GenBankmRNA	BY742122.1	-	1	283		Chr. 3 - 115881602 - 115888130 [-] on Build GRCm38	114

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	sphingosine-1-phosphate receptor 1	S1pr1	AI849002, Edg1, Lpb1, S1p, S1p1	-172.7kb	Sense	Chr. 3 - 115710433 - 115715055 on NCBI Build GRCm38
Downstream	DPH5 homolog (S. cerevisiae)	Dph5	2410012M04Rik, AU045680, C80186	247.0	Anti-sense	Chr. 3 - 115888165 - 115929323 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300002799.mm.1

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300022025.mm.1	TC0300002799.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022025.mm.1	NR_015487.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022025.mm.1	NR_015487.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022025.mm.1	NR_027895.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022025.mm.1	NR_027895.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022018.mm.1	TC0300002799.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022018.mm.1	NR_027894.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022018.mm.1	NR_027894.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022024.mm.1	TC0300002799.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022024.mm.1	NR_015487.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022024.mm.1	NR_015487.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022024.mm.1	NR_027894.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022024.mm.1	NR_027894.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022024.mm.1	NR_027895.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022024.mm.1	NR_027895.1	Refseq