Mm03930449_m1

• Gene Symbol: Snhg12
• Gene Name: small nucleolar RNA host gene 12
• Gene Aliases: 2310005L22Rik
• Chromosome Location: Chr.4: 132308678 - 132311024 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Snhg12
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_029468.1		1 - 2	226		96
GenBank mRNA	AK009175.1	-	1 - 2	230		96
	BY130275.1	-	1 - 2	227		96
	CB201672.1	-	1 - 2	211		96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AW911793.1	-	1 - 2	185		Chr. 4 - 132308719 - 132310443 [+] on Build GRCm38	96
GenBankmRNA	BE689861.1	-	1 - 2	186		Chr. 4 - 132308718 - 132310911 [+] on Build GRCm38	96
GenBankmRNA	CF616156.1	-		277		Chr. - - [-] on Build	96
GenBankmRNA	AA060788.1	-	1 - 2	91		Chr. 4 - 132308813 - 132311023 [+] on Build GRCm38	96
GenBankmRNA	AV573991.1	-	1 - 2	155		Chr. 4 - 132308748 - 132310917 [+] on Build GRCm38	96
GenBankmRNA	BX523517.1	-	1 - 2	90		Chr. 4 - 132308814 - 132310216 [+] on Build GRCm38	96
GenBankmRNA	W18050.1	-		179		Chr. - - [-] on Build	96
GenBankmRNA	W30288.1	-		198		Chr. - - [-] on Build	96
GenBankmRNA	BY088812.1	-	1 - 2	226		Chr. 4 - 132308678 - 132310203 [+] on Build GRCm38	96
GenBankmRNA	AA030367.1	-	1 - 2	199		Chr. 4 - 132308705 - 132310888 [+] on Build GRCm38	96
GenBankmRNA	AV511014.1	-	1 - 2	211		Chr. 4 - 132308699 - 132310375 [+] on Build GRCm38	96
GenBankmRNA	BY099239.1	-	1 - 2	226		Chr. 4 - 132308678 - 132310216 [+] on Build GRCm38	96
GenBankmRNA	BY111987.1	-	1 - 2	226		Chr. 4 - 132308678 - 132310201 [+] on Build GRCm38	96
GenBankmRNA	BY113210.1	-	1 - 2	227		Chr. 4 - 132308678 - 132310216 [+] on Build GRCm38	97
GenBankmRNA	BG803564.1	-	1 - 2	184		Chr. 4 - 132308720 - 132310492 [+] on Build GRCm38	96
GenBankmRNA	BU551930.1	-	1 - 2	131		Chr. 4 - 132308773 - 132310927 [+] on Build GRCm38	96
GenBankmRNA	BY333000.1	-	1 - 2	226		Chr. 4 - 132308678 - 132310166 [+] on Build GRCm38	96
GenBankmRNA	BY329920.1	-	1 - 2	228		Chr. 4 - 132308678 - 132310174 [+] on Build GRCm38	96
GenBankmRNA	AA060945.1	-	1 - 2	224		Chr. 4 - 132308693 - 132310504 [+] on Build GRCm38	96
GenBankmRNA	BQ031695.1	-	4 - 5			Chr. 4 - 132308825 - 132311024 [-] on Build GRCm38	96
GenBankmRNA	AV583500.1	-	1 - 2	140		Chr. 4 - 132308764 - 132310876 [+] on Build GRCm38	96
GenBankmRNA	AA027642.1	-	1 - 2	200		Chr. 4 - 132308704 - 132310891 [+] on Build GRCm38	96
GenBankmRNA	EL965250.1	-	1 - 2	192		Chr. 4 - 132308726 - 132310927 [+] on Build GRCm38	96
GenBankmRNA	AW989652.1	-	1 - 2	186		Chr. 4 - 132308718 - 132310895 [+] on Build GRCm38	96
GenBankmRNA	BE200523.1	-	1 - 2	202		Chr. 4 - 132308702 - 132310900 [+] on Build GRCm38	96
GenBankmRNA	AA797534.1	-	1 - 2	131		Chr. 4 - 132308773 - 132310853 [+] on Build GRCm38	96
GenBankmRNA	BY125255.1	-	1 - 2	226		Chr. 4 - 132308678 - 132310174 [+] on Build GRCm38	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	small nucleolar RNA, H/ACA box 16A	Snora16a			Sense	Chr. 4 - 132309465 - 132309600 on NCBI Build GRCm38
Downstream	small nucleolar RNA, H/ACA box 44	Snora44	MBI-64	50.0	Sense	Chr. 4 - 132309953 - 132310069 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400001582.mm.1
This assay targets the same location as RTA transcript cluster(s) TC0800001456.rn

• Set Membership: Amplicon length between 86 and 100, Mus musculus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400012409.mm.1	NR_029468.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400012409.mm.1	NR_029468.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400012409.mm.1	TC0400001582.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400012412.mm.1	NR_029468.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400012412.mm.1	NR_029468.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400012412.mm.1	TC0400001582.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	495135	-	-