Mm03940793_s1

• Gene Symbol: Mfap3l
• Gene Name: microfibrillar-associated protein 3-like
• Gene Aliases: 4933428A15Rik, 5430405D20Rik, AI461995, AW125052, NYD-sp9, mKIAA0626
• Chromosome Location: Chr.8: 60632825 - 60676731 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Mfap3l
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001177881.1	NP_001171352.1	3	6259		83
	NM_001177882.1	NP_001171353.1	3	6027		83
	NM_001293769.1	NP_001280698.1	2	5721		83
	NM_027756.5	NP_082032.1	3	6151		83
GenBank mRNA	AK017269.1	-	1	1652		83

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BF146299.1	-	1			Chr. 8 - 60676262 - 60676725 [-] on Build GRCm38	83
GenBankmRNA	BE196976.1	-	1			Chr. 8 - 60676267 - 60676726 [-] on Build GRCm38	83
GenBankmRNA	BB519927.1	-	1	112		Chr. 8 - 60676399 - 60676726 [+] on Build GRCm38	83
GenBankmRNA	CJ256615.1	-	1	307		Chr. 8 - 60676219 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	CJ253753.1	-	1	251		Chr. 8 - 60676260 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	BF322902.1	-	1			Chr. 8 - 60676257 - 60676729 [-] on Build GRCm38	83
GenBankmRNA	CJ254252.1	-	1	230		Chr. 8 - 60676281 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	CJ253659.1	-	1	270		Chr. 8 - 60676241 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	AI461995.1	-	1			Chr. 8 - 60676301 - 60676726 [-] on Build GRCm38	83
GenBankmRNA	CJ252103.1	-	1	268		Chr. 8 - 60676243 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	BG975950.1	-	1	253		Chr. 8 - 60676258 - 60676725 [+] on Build GRCm38	83
GenBankmRNA	BE133128.1	-	1			Chr. 8 - 60676291 - 60676729 [-] on Build GRCm38	83
GenBankmRNA	BE137600.1	-	1	341		Chr. 8 - 60676170 - 60676605 [+] on Build GRCm38	83
GenBankmRNA	AW985850.1	-	1			Chr. 8 - 60676306 - 60676726 [-] on Build GRCm38	83
GenBankmRNA	CJ251241.1	-	1	267		Chr. 8 - 60676244 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	CJ305925.1	-	1	188		Chr. 8 - 60676323 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	AW125052.1	-	1			Chr. 8 - 60676236 - 60676726 [-] on Build GRCm38	83
GenBankmRNA	BX515750.1	-	1	346		Chr. 8 - 60676174 - 60676713 [+] on Build GRCm38	83
GenBankmRNA	CJ258972.1	-	1	241		Chr. 8 - 60676270 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	CJ252403.1	-	1	280		Chr. 8 - 60676232 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	CJ301785.1	-	1	222		Chr. 8 - 60676289 - 60676727 [+] on Build GRCm38	83
GenBankmRNA	AI120312.1	-	1	341		Chr. 8 - 60676170 - 60676580 [+] on Build GRCm38	83
GenBankmRNA	BE650457.1	-	1	360		Chr. 8 - 60676151 - 60676726 [+] on Build GRCm38	83
GenBankmRNA	CJ255879.1	-	1	236		Chr. 8 - 60676275 - 60676727 [+] on Build GRCm38	83

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	aminoadipate aminotransferase	Aadat	AI875679, Aadt, KATII, Kat2, mKat-2	-129.2kb	Sense	Chr. 8 - 60505870 - 60545677 on NCBI Build GRCm38
Downstream	RIKEN cDNA 2700029M09 gene	2700029M09Rik	C230006B22Rik	213.7kb	Sense	Chr. 8 - 60890393 - 60907582 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0800000646.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Mfap3l

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0800004314.mm.1	TC0800000646.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800004314.mm.1	NM_001177881.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004314.mm.1	NM_001177881.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004314.mm.1	NM_001177882.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004314.mm.1	NM_001177882.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004314.mm.1	NM_027756.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004313.mm.1	TC0800000646.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0800004313.mm.1	NM_001177881.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004313.mm.1	NM_001177881.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004313.mm.1	NM_001177882.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004313.mm.1	NM_001177882.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0800004313.mm.1	NM_027756.5	Refseq