Mm03956497_s1

• Gene Symbol: Crkl
• Gene Name: v-crk sarcoma virus CT10 oncogene homolog (avian)-like
• Gene Aliases: 1110025F07Rik, AA589403, AI325100, Crkol
• Chromosome Location: Chr.16: 17451985 - 17487440 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Crkl
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001277231.1	NP_001264160.1	2	3949		103
	NM_007764.5	NP_031790.2	3	4415		103
GenBank mRNA	AK003911.1	-	1	346		103
	AK087977.1	-	1	1271		103
	BF453354.1	-	1	169		103

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BP764489.1	-	1			Chr. 16 - 17486755 - 17487291 [-] on Build GRCm38	103
GenBankmRNA	BY761703.1	-	1	364		Chr. 16 - 17486539 - 17487432 [+] on Build GRCm38	103
GenBankmRNA	AA469692.1	-	1	138		Chr. 16 - 17486668 - 17487076 [+] on Build GRCm38	103
GenBankmRNA	BF023362.1	-	1	412		Chr. 16 - 17486400 - 17486936 [+] on Build GRCm38	103
GenBankmRNA	BY466799.1	-	1	44		Chr. 16 - 17486769 - 17487288 [+] on Build GRCm38	103
GenBankmRNA	BP761857.1	-	1			Chr. 16 - 17486760 - 17487291 [-] on Build GRCm38	103
GenBankmRNA	BY704166.1	-	1	346		Chr. 16 - 17486460 - 17487408 [+] on Build GRCm38	103
GenBankmRNA	BQ177832.1	-	1	525		Chr. 16 - 17486281 - 17486990 [+] on Build GRCm38	103
GenBankmRNA	CA876152.1	-	1			Chr. 16 - 17486744 - 17487288 [-] on Build GRCm38	102
GenBankmRNA	AA589403.1	-	1	294		Chr. 16 - 17486512 - 17487034 [+] on Build GRCm38	103
GenBankmRNA	AA208873.1	-	1	33		Chr. 16 - 17486773 - 17487182 [+] on Build GRCm38	104
GenBankmRNA	BM235304.2	-	1			Chr. 16 - 17486764 - 17487159 [-] on Build GRCm38	103
GenBankmRNA	BQ964066.1	-	1	293		Chr. 16 - 17486517 - 17487435 [+] on Build GRCm38	103
GenBankmRNA	BY755012.1	-	1	77		Chr. 16 - 17486729 - 17487420 [+] on Build GRCm38	103
GenBankmRNA	CB205780.1	-	1	404		Chr. 16 - 17486414 - 17487230 [+] on Build GRCm38	103
GenBankmRNA	BE648808.1	-	1	111		Chr. 16 - 17486695 - 17487050 [+] on Build GRCm38	103
GenBankmRNA	CK635102.1	-	1	176		Chr. 16 - 17486630 - 17487291 [+] on Build GRCm38	103
GenBankmRNA	BU705483.1	-	1	178		Chr. 16 - 17486703 - 17487305 [+] on Build GRCm38	103
GenBankmRNA	BP762307.1	-	1			Chr. 16 - 17486601 - 17487291 [-] on Build GRCm38	103
GenBankmRNA	AA763593.1	-	1	306		Chr. 16 - 17486500 - 17487034 [+] on Build GRCm38	103

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	synaptosomal-associated protein 29	Snap29	1300018G05Rik, AI891940, AU020222, BB131856, Gs32	-55.6kb	Sense	Chr. 16 - 17406000 - 17430826 on NCBI Build GRCm38
Downstream	apoptosis-inducing factor, mitochondrion-associated 3	Aifm3	2810401C16Rik, AI840249, Aifl	2.2kb	Sense	Chr. 16 - 17489616 - 17507485 on NCBI Build GRCm38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Crkl

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

blood vessel development
pattern specification process
heart development
organ morphogenesis
anterior/posterior pattern specification
thymus development
parathyroid gland development

Function(s)

protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1600001783.mm.1	NM_001277231.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001783.mm.1	NM_007764.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001783.mm.1	TC1600000216.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600001781.mm.1	NM_001277231.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001781.mm.1	NM_007764.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001781.mm.1	TC1600000216.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600001782.mm.1	NM_001277231.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001782.mm.1	NM_007764.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001782.mm.1	TC1600000216.mm.1	MTA TC