Mm03956904_s1

• Gene Symbol: Carlr
• Gene Name: cardiac and apoptosis-related long non-coding RNA
• Gene Aliases: 4933439G12Rik, Carl
• Chromosome Location: -
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Carlr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	AK017121.1	-	1	1411		67
	AK018938.1	-	1	152		67

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI595626.1	-	1			Chr. 2 - 18799636 - 18800047 [-] on Build GRCm38	67
GenBankmRNA	CN833497.1	-		159		Chr. - - [-] on Build	67
GenBankmRNA	BX639360.1	-	1			Chr. 2 - 18799589 - 18799985 [+] on Build GRCm38	67
GenBankmRNA	BY707199.1	-	1	147		Chr. 2 - 18799589 - 18800029 [-] on Build GRCm38	67
GenBankmRNA	BU939151.1	-	1	174		Chr. 2 - 18799589 - 18800053 [-] on Build GRCm38	67
GenBankmRNA	CN843207.1	-		177		Chr. - - [-] on Build	67
GenBankmRNA	AI429107.1	-	1			Chr. 2 - 18799589 - 18799979 [+] on Build GRCm38	67

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	predicted gene 3363	Gm3363		-38.7kb	Sense	Chr. 2 - 18742709 - 18760862 on NCBI Build GRCm38
Downstream	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	Pip4k2a	AW742916, Pip5k2a	42.2kb	Sense	Chr. 2 - 18842255 - 18998527 on NCBI Build GRCm38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Mus musculus, 1700, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2202425	AK017121.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2202425	AW491495.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	778087	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	145243	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1429840_PM_at	-	-
Mouse Genome 430 2.0 Array	1429840_PM_at	-	-
Mouse Genome 430 2.0 Array	1429840_at	-	-
Mouse Expression Set 430	1429840_PM_at	-	-
Mouse Expression Set 430	1429840_at	-	-
Affymetrix HT Mouse Genome 430B Array	1429840_at	-	-
Affymetrix HT Mouse Genome 430B Array	1429840_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	312697	-	-