Mm04207948_gH Best Coverage

• Gene Symbol: Ddx3x
• Gene Name: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
• Gene Aliases: D1Pas1-rs2, Ddx3, Fin14
• Chromosome Location: Chr.X: 13280496 - 13293983 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ddx3x
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010028.3	NP_034158.1	8 - 9	854		106
GenBank mRNA	AK140990.1	-	8 - 9	855		106
	AK163250.1	-	8 - 9	829		106
	AK188456.1	-	3 - 4	248		106
	BC150862.1	-	8 - 9	808	9087773	106
	BC172016.1	-	8 - 9	805	9054302	106
	L25126.1	-	8 - 9	786		106
	Z38117.1	-	8 - 9	838		106

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00000166.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ddx3x

Gene Ontology Categories:

Process(es)

immune system process
transcription, DNA-templated
regulation of transcription, DNA-templated
translational initiation
regulation of translation
apoptotic process
chromosome segregation
extrinsic apoptotic signaling pathway via death domain receptors
response to virus
regulation of gene expression
RNA secondary structure unwinding
positive regulation of gene expression
negative regulation of translation
positive regulation of cell growth
negative regulation of cell growth
negative regulation of protein-containing complex assembly
DNA duplex unwinding
stress granule assembly
intracellular signal transduction
ribosome biogenesis
mature ribosome assembly
positive regulation of apoptotic process
negative regulation of apoptotic process
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
positive regulation of viral genome replication
innate immune response
positive regulation of translation
positive regulation of transcription by RNA polymerase II
positive regulation of translational initiation
cellular response to arsenic-containing substance
cellular response to osmotic stress
intrinsic apoptotic signaling pathway
positive regulation of G1/S transition of mitotic cell cycle
negative regulation of intrinsic apoptotic signaling pathway

Function(s)

nucleotide binding
nucleic acid binding
DNA binding
DNA helicase activity
RNA binding
RNA helicase activity
GTPase activity
helicase activity
protein binding
ATP binding
transcription factor binding
poly(A) binding
eukaryotic initiation factor 4E binding
hydrolase activity
ATP hydrolysis activity
nucleoside-triphosphatase activity
translation initiation factor binding
RNA stem-loop binding
ribosomal small subunit binding
CTPase activity
mRNA 5'-UTR binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00001073.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001073.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001073.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001078.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001078.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001078.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001067.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001067.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001067.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001072.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001072.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001072.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001070.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001070.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001070.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001077.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001077.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001077.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001068.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001068.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001068.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001069.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001069.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001069.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001074.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001074.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001074.mm.1	NM_010028.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001075.mm.1	TC0X00000166.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001075.mm.1	NM_010028.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001075.mm.1	NM_010028.3	Refseq