Mm04208182_m1

• Gene Symbol: Sox17
• Gene Name: SRY (sex determining region Y)-box 17
• Gene Aliases: -
• Chromosome Location: Chr.1: 4490928 - 4497388 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox17
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001289465.1	NP_001276394.1	2 - 3	1878		76
	NM_001289466.1	NP_001276395.1	2 - 3	1134		76
	NM_011441.5	NP_035571.1	2 - 3	1878		76
GenBank mRNA	AK004781.1	-	2 - 3	939		76
	AK013848.1	-	1 - 2	163		76
	AK076707.1	-	2 - 3	1881		76

More Information

Additional Information:

This assay is in the 5'UTR region of the AK004781.1, NM_001289465.1, NM_001289466.1, NM_011441.5 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sox17

Panther Classification:

Molecular Function -

HMG box transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
angiogenesis
vasculogenesis
endoderm formation
inner cell mass cellular morphogenesis
heart looping
cardiogenic plate morphogenesis
embryonic heart tube morphogenesis
outflow tract morphogenesis
negative regulation of Wnt signaling pathway involved in heart development
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatogenesis
gastrulation
endoderm development
endodermal cell fate determination
positive regulation of gene expression
Wnt signaling pathway
rostrocaudal neural tube patterning
signal transduction involved in regulation of gene expression
negative regulation of Wnt signaling pathway
negative regulation of cell growth
protein destabilization
embryonic heart tube development
cell migration involved in gastrulation
regulation of mesodermal cell fate specification
negative regulation of mesodermal cell fate specification
mRNA transcription from RNA polymerase II promoter
regulation of cell differentiation
positive regulation of cell differentiation
positive regulation of protein catabolic process
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of embryonic development
embryonic organ development
embryonic foregut morphogenesis
positive regulation of skeletal muscle tissue development
stem cell differentiation
stem cell fate specification
protein stabilization
canonical Wnt signaling pathway
endocardium formation
regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification
cardiac cell fate determination
endocardial cell differentiation
common bile duct development
gall bladder development
endodermal digestive tract morphogenesis
renal system development
regulation of stem cell proliferation
negative regulation of canonical Wnt signaling pathway
regulation of stem cell division
regulation of cardiac cell fate specification

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
transcription coactivator activity
protein binding
beta-catenin binding
transcription factor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100015735.mm.1	NM_001289464.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015735.mm.1	NM_011441.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015735.mm.1	TC0100001905.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100015736.mm.1	NM_001289464.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015736.mm.1	NM_011441.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015736.mm.1	TC0100001905.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100015740.mm.1	NM_001289465.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015740.mm.1	NM_001289466.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015740.mm.1	NM_011441.5	Refseq
Affymetrix Mouse Clariom S Array	PSR0100015740.mm.1	TC0100001905.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	774026	-	-