Mm04236688_s1

• Gene Symbol: AI414108
• Gene Name: expressed sequence AI414108
• Gene Aliases: AI854107
• Chromosome Location: Chr.9: 27352685 - 27357546 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: AI414108
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027907.1		1	3743		96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI120871.1	-	1	183		Chr. 9 - 27356256 - 27356604 [+] on Build GRCm38	96
GenBankmRNA	BQ555572.1	-	1	356		Chr. 9 - 27356077 - 27356567 [+] on Build GRCm38	96
GenBankmRNA	BF582932.1	-		49		Chr. - - [-] on Build	96
GenBankmRNA	CX206752.1	-	1	346		Chr. 9 - 27356082 - 27356785 [+] on Build GRCm38	96
GenBankmRNA	CX219539.1	-	1	346		Chr. 9 - 27356082 - 27356767 [+] on Build GRCm38	96
GenBankmRNA	BX526185.1	-	1	173		Chr. 9 - 27356256 - 27356772 [+] on Build GRCm38	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	immunoglobulin superfamily, member 9B	Igsf9b	Gm508, mKIAA1030		Sense	Chr. 9 - 27299104 - 27357549 on NCBI Build GRCm38
Downstream	spermatogenesis associated 19	Spata19	1700001L23Rik, AV047838, spergen-1	39.3kb	Sense	Chr. 9 - 27396821 - 27401711 on NCBI Build GRCm38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2408778	AK138227.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2408778	NR_027907.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	16753	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	938609	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	41413	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375652	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375636	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375645	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375660	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375646	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P07600511	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P07847142	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08138027	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375644	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375654	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375649	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375638	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375643	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375640	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P26375657	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1440262_PM_at	-	-
Mouse Genome 430 2.0 Array	1440262_PM_at	-	-
Mouse Genome 430 2.0 Array	1440262_at	-	-
Affymetrix Mouse Clariom S Array	PSR0900001977.mm.1	NR_027907.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900001977.mm.1	NR_027907.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900001977.mm.1	TC0900000260.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900001976.mm.1	NR_027907.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900001976.mm.1	NR_027907.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900001976.mm.1	TC0900000260.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900001978.mm.1	NR_027907.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900001978.mm.1	NR_027907.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900001978.mm.1	TC0900000260.mm.1	MTA TC
Mouse Expression Set 430	1440262_at	-	-
Mouse Expression Set 430	1440262_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1440262_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1440262_at	-	-