Mm04237707_s1

• Gene Symbol: Snhg8
• Gene Name: small nucleolar RNA host gene 8
• Gene Aliases: 1110065M07Rik, 2010109N14Rik
• Chromosome Location: Chr.3: 123507552 - 123508336 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Snhg8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_028574.1		1	240		89

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BU514542.1	-		224		Chr. - - [-] on Build	89
GenBankmRNA	BX514931.1	-	1	231		Chr. 3 - 123507804 - 123508326 [-] on Build GRCm38	89
GenBankmRNA	DT917587.1	-	1	160		Chr. 3 - 123507967 - 123508256 [-] on Build GRCm38	89
GenBankmRNA	EG563581.1	-	2			Chr. 3 - 123507550 - 123508169 [+] on Build GRCm38	89
GenBankmRNA	CN697691.1	-	1	199		Chr. 3 - 123507970 - 123508295 [-] on Build GRCm38	89
GenBankmRNA	AV505345.1	-	1	222		Chr. 3 - 123507840 - 123508318 [-] on Build GRCm38	89
GenBankmRNA	CN697633.1	-	1	199		Chr. 3 - 123507757 - 123508295 [-] on Build GRCm38	89
GenBankmRNA	CB181105.1	-	1	257		Chr. 3 - 123507562 - 123508330 [-] on Build GRCm38	89
GenBankmRNA	CN693661.1	-	1	227		Chr. 3 - 123507686 - 123508323 [-] on Build GRCm38	89

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	small nucleolar RNA, H/ACA box 24	Snora24	ACA24		Sense	Chr. 3 - 123507937 - 123508066 on NCBI Build GRCm38
Downstream	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	Ndst3	4921531K01Rik, 4930511P15Rik, N-HSST 3, NDST-3	17.8kb	Sense	Chr. 3 - 123526166 - 123690852 on NCBI Build GRCm38

More Information

Additional Information:

This assay targets the same location as MTA transcript cluster(s) TC0300002878.mm
This assay targets the same location as RTA transcript cluster(s) TC0100004321.rn

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Mus musculus, 1700, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Whole Mouse Genome G4122A	A_51_P115098	NR_028574.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P115098	AK008369.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P115098	BC025067.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P135277	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1447896_PM_s_at	-	-
Affymetrix HT MG-430 PM Array Plate	1435524_PM_at	-	-
Affymetrix Mouse Gene 1.1 ST Array	10501922	-	-
Affymetrix Mouse Clariom S Array	PSR0300022777.mm.1	NR_028574.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022777.mm.1	NR_028574.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022777.mm.1	TC0300002878.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022779.mm.1	NR_028574.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022779.mm.1	NR_028574.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022779.mm.1	TC0300002878.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022782.mm.1	NR_028574.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022782.mm.1	NR_028574.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022782.mm.1	TC0300002878.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022776.mm.1	NR_028574.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022776.mm.1	NR_028574.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022776.mm.1	TC0300002878.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022780.mm.1	NR_028573.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022780.mm.1	NR_028573.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022780.mm.1	NR_028574.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022780.mm.1	NR_028574.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022780.mm.1	TC0300002878.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022775.mm.1	NR_028574.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022775.mm.1	NR_028574.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022775.mm.1	TC0300002878.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022778.mm.1	NR_028574.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022778.mm.1	NR_028574.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022778.mm.1	TC0300002878.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300022781.mm.1	NR_028574.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022781.mm.1	NR_028574.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300022781.mm.1	TC0300002878.mm.1	MTA TC
Mouse Expression Set 430	1435524_at	-	-
Mouse Expression Set 430	1435524_PM_at	-	-
Mouse Expression Set 430	1447896_s_at	-	-
Mouse Expression Set 430	1447896_PM_s_at	-	-
Murine Genome U74v2 Set	165862_f_at	-	-
Murine Genome U74v2 Set	165863_PM_r_at	-	-
Murine Genome U74v2 Set	165862_PM_f_at	-	-
Murine Genome U74v2 Set	165863_r_at	-	-
Mouse Genome 430A 2.0 Array	1435524_PM_at	-	-
Mouse Genome 430A 2.0 Array	1435524_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	330257	-	-