Mm04237762_s1

• Gene Symbol: Scarna13
• Gene Name: small Cajal body-specific RNA 1
• Gene Aliases: U93
• Chromosome Location: Chr.12: 105031075 - 105031349 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Scarna13
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_028576.1		1	49		68

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BE633860.1	-	1	184		Chr. 12 - 105031013 - 105031485 [-] on Build GRCm38	68

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 3069	Mir3069	mir-3069, mmu-mir-3069		Sense	Chr. 12 - 105031077 - 105031141 on NCBI Build GRCm38
Downstream	glutaredoxin 5 homolog (S. cerevisiae)	Glrx5	2310004O13Rik, 2900070E19Rik, AU020725	1.3kb	Anti-sense	Chr. 12 - 105032689 - 105040910 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200002303.mm.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1457041_PM_at	-	-
Affymetrix Mouse Gene 1.1 ST Array	10402512	-	-
Affymetrix Mouse Clariom S Array	PSR1200016072.mm.1	TC1200002303.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200016072.mm.1	NR_028576.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200016072.mm.1	NR_028576.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200016072.mm.1	NR_037229.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200016072.mm.1	NR_037229.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200016073.mm.1	TC1200002303.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200016073.mm.1	NR_028576.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200016073.mm.1	NR_028576.1	Refseq