Mm04238950_m1

• Gene Symbol: AI427809
• Gene Name: expressed sequence AI427809
• Gene Aliases: Gm1659
• Chromosome Location: Chr.4: 53261356 - 53270232 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: AI427809
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033140.1		1 - 2	242		81
GenBank mRNA	BC086687.1	-	1 - 2	242		81

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CO428746.1	-	1 - 2	242		Chr. 4 - 53262799 - 53265492 [-] on Build GRCm38	81

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RIKEN cDNA 4930522O17 gene	4930522O17Rik		-10.2kb	Anti-sense	Chr. 4 - 53246196 - 53251120 on NCBI Build GRCm38
Downstream	solute carrier family 44, member 1	Slc44a1	2210409B22Rik, 4833416H08Rik, AW547365, CHTL1, CTL1, Cdw92	174.9kb	Anti-sense	Chr. 4 - 53440413 - 53622478 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400002668.mm.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Mus musculus, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400021679.mm.1	TC0400002668.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400021679.mm.1	NR_033140.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021679.mm.1	NR_033140.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021675.mm.1	TC0400002668.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400021675.mm.1	NR_033139.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021675.mm.1	NR_033139.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021675.mm.1	NR_033140.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021675.mm.1	NR_033140.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021674.mm.1	TC0400002668.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400021674.mm.1	NR_033139.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021674.mm.1	NR_033139.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021674.mm.1	NR_033140.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021674.mm.1	NR_033140.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021673.mm.1	TC0400002668.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400021673.mm.1	NR_033139.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021673.mm.1	NR_033139.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021673.mm.1	NR_033140.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021673.mm.1	NR_033140.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021676.mm.1	TC0400002668.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400021676.mm.1	NR_033139.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021676.mm.1	NR_033139.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021676.mm.1	NR_033140.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400021676.mm.1	NR_033140.1	Refseq