Name: [Mm04240921_m1] [Gm5084]
Creator: Thermo Fisher Scientific
Keywords: [Gm5084] Assay, [predicted gene 5084] Assay

Assay Details

Gene Symbol: Gm5084
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_036449.1		3 - 4	2858		82
GenBank mRNA	AK037190.1	-	3 - 4	2859		82

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BX515698.1	-	1 - 2	226	Chr. 13 - 60212915 - 60215580 [+] on Build GRCm38	82
GenBankmRNA	AI464751.1	-	1 - 2	225	Chr. 13 - 60212916 - 60215582 [+] on Build GRCm38	82
GenBankmRNA	AA255008.1	-	1 - 2	188	Chr. 13 - 60212953 - 60215459 [+] on Build GRCm38	82

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	growth arrest specific 1	Gas1	AW554192, Gas-1	-34.3kb	Anti-sense	Chr. 13 - 60174405 - 60177535 on NCBI Build GRCm38
Downstream	RIKEN cDNA A530001N23 gene	A530001N23Rik		267.9kb	Anti-sense	Chr. 13 - 60483921 - 60508840 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1300000731.mm.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mus musculus

Probe spans exons

MicroArray Probes:

Agilent Affymetrix

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P557395	AK037190.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P557395	NR_036449.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P557395	AK037190.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P557395	NR_036449.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P557395	AK037190.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P557395	NR_036449.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P557395	AK037190.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P557395	NR_036449.1	mouse_transcriptome
Agilent Six_ChIP_03_of_03_v2	A_68_P29084081	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084120	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084115	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084101	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084076	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084118	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084181	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084103	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084086	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084126	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10937915	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084069	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084094	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084117	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10588310	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084093	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084168	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084182	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084079	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084077	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10548498	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10548497	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084098	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10937917	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084090	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084136	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084097	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084111	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084122	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084169	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084158	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084166	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084074	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084159	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10438332	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084180	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084112	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084070	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084138	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084087	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084137	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10937925	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084170	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084130	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084100	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084161	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084109	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084128	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084083	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084104	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084132	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10689859	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P11043188	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P10549385	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084121	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084096	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084184	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084082	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084075	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084072	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P29084110	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1300004864.mm.1	TC1300000731.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300004864.mm.1	NR_036449.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300004864.mm.1	NR_036449.1	Refseq
Mouse Expression Set 430	1459259_at	-	-
Mouse Expression Set 430	1459259_PM_at	-	-
Murine Genome U74v2 Set	134808_at	-	-
Murine Genome U74v2 Set	134808_PM_at	-	-

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