Mm04278273_m1

• Gene Symbol: Plxna4os1
• Gene Name: plexin A4, opposite strand 1
• Gene Aliases: B230378P21Rik
• Chromosome Location: Chr.6: 32511141 - 32515576 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Plxna4os1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_040277.1		1 - 2	311		88
GenBank mRNA	AK038471.1	-	1 - 2	307		88
	AK046388.1	-	1 - 2	225		88
	BB535018.2	-	1 - 2	311		88

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB632231.1	-	1 - 2	305		Chr. 6 - 32511148 - 32514266 [+] on Build GRCm38	88
GenBankmRNA	BB664461.1	-	1 - 2	379		Chr. 6 - 32511073 - 32514223 [+] on Build GRCm38	88
GenBankmRNA	AA168477.1	-	1 - 2	309		Chr. 6 - 32511143 - 32514159 [+] on Build GRCm38	88
GenBankmRNA	BX522605.1	-	1 - 2	310		Chr. 6 - 32511143 - 32514202 [+] on Build GRCm38	88
GenBankmRNA	BB170203.2	-	1 - 2	306		Chr. 6 - 32511149 - 32514312 [+] on Build GRCm38	88
GenBankmRNA	AI592193.1	-	1 - 2	309		Chr. 6 - 32511143 - 32514132 [+] on Build GRCm38	88
GenBankmRNA	BB645013.1	-	1 - 2	225		Chr. 6 - 32511228 - 32514415 [+] on Build GRCm38	88

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	plexin A4	Plxna4	9330117B14, Plxa4, mKIAA1550		Anti-sense	Chr. 6 - 32144543 - 32588192 on NCBI Build GRCm38
Downstream	coiled-coil-helix-coiled-coil-helix domain containing 3	Chchd3	0610041L09Rik, 1700039J09Rik, AW558177	276.6kb	Anti-sense	Chr. 6 - 32792217 - 33060276 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600000305.mm.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mus musculus, 1700, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2199457	BB319156.2	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2199457	AK046388.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2199457	BB319156.2	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2199457	AK046388.1	mouse_transcriptome

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1446116_PM_at	-	-
Mouse Genome 430 2.0 Array	1446116_at	-	-
Mouse Genome 430 2.0 Array	1446116_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0600002269.mm.1	TC0600000305.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600002269.mm.1	NR_040277.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600002269.mm.1	NR_040277.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600002270.mm.1	TC0600000305.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600002270.mm.1	NR_040277.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600002270.mm.1	NR_040277.1	Refseq
Mouse Expression Set 430	1446116_PM_at	-	-
Mouse Expression Set 430	1446116_at	-	-
Affymetrix HT Mouse Genome 430B Array	1446116_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1446116_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	572399	-	-