Mm04335143_g1

• Gene Symbol: Hoxaas3
• Gene Name: Hoxa cluster antisense RNA 3
• Gene Aliases: 2700086A05Rik
• Chromosome Location: Chr.6: 52201124 - 52213597 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hoxaas3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015611.2		2 - 3	275		88
GenBank mRNA	AK012572.1	-	2 - 3	208		88
	AK028207.1	-	2 - 3	276		88
	AK146012.1	-		170		88

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BY737288.1	-	2 - 3	170		Chr. 6 - 52175233 - 52213529 [+] on Build GRCm38	88
GenBankmRNA	BY711751.1	-	2 - 3	276		Chr. 6 - 52201124 - 52213508 [+] on Build GRCm38	88

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	homeobox A6	Hoxa6	Hox-1.2	-3.8kb	Anti-sense	Chr. 6 - 52206365 - 52208624 on NCBI Build GRCm38
Downstream	homeobox A7	Hoxa7	AV118143, Hox-1.1, M6	894.0	Anti-sense	Chr. 6 - 52214491 - 52221852 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600000620.mm.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Mus musculus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600004746.mm.1	TC0600000620.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600004746.mm.1	NR_015611.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600004745.mm.1	TC0600000620.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600004745.mm.1	NR_015611.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	339040	-	-