Mm04335615_m1

• Gene Symbol: Sh2d3c
• Gene Name: SH2 domain containing 3C
• Gene Aliases: Chat, Nsp3, Shep1
• Chromosome Location: Chr.2: 32721055 - 32755007 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sh2d3c
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045535.1		4 - 5	1105		60
GenBank mRNA	AK172072.1	-	4 - 5	1026		60

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CJ144569.1	-	1 - 2	183		Chr. 2 - 32741489 - 32746017 [+] on Build GRCm38	60
GenBankmRNA	CJ145113.1	-	1 - 2	202		Chr. 2 - 32741470 - 32745939 [+] on Build GRCm38	60
GenBankmRNA	BY145345.1	-	1 - 2	161		Chr. 2 - 32741511 - 32745888 [+] on Build GRCm38	60
GenBankmRNA	CJ145284.1	-	1 - 2	207		Chr. 2 - 32741465 - 32745919 [+] on Build GRCm38	60
GenBankmRNA	CJ144947.1	-	1 - 2	185		Chr. 2 - 32741489 - 32745965 [+] on Build GRCm38	60
GenBankmRNA	CJ144131.1	-	1 - 2	183		Chr. 2 - 32741489 - 32745983 [+] on Build GRCm38	60
GenBankmRNA	BU707954.1	-	1 - 2	181		Chr. 2 - 32741490 - 32746285 [+] on Build GRCm38	60

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RIKEN cDNA 6330409D20 gene	6330409D20Rik	AA517851	-194.0	Anti-sense	Chr. 2 - 32732620 - 32741016 on NCBI Build GRCm38
Downstream	tetratricopeptide repeat domain 16	Ttc16	1200002K10Rik	12.1kb	Anti-sense	Chr. 2 - 32757026 - 32775663 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200000591.mm.1

• Set Membership: Amplicon length less than or equal to 70, Mus musculus, Probe spans exons

Gene Ontology Categories:

Process(es)

signal transduction
transmembrane receptor protein tyrosine kinase signaling pathway
small GTPase mediated signal transduction
positive regulation of signal transduction

Function(s)

transmembrane receptor protein tyrosine kinase adaptor activity
guanyl-nucleotide exchange factor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200005433.mm.1	NM_001252547.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200005433.mm.1	NM_001252547.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200005433.mm.1	NM_013781.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200005433.mm.1	NM_013781.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200005433.mm.1	NR_045535.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200005433.mm.1	NR_045535.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200005433.mm.1	TC0200000591.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200005431.mm.1	NR_045535.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200005431.mm.1	NR_045535.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200005431.mm.1	TC0200000591.mm.1	MTA TC