Mm04411278_s1

• Gene Symbol: Mir6540
• Gene Name: microRNA 6540
• Gene Aliases: Gm27780, mir-6540, mmu-mir-6540
• Chromosome Location: Chr.16: 42303362 - 42303469 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Mir6540
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_105858.1		1	57		61

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	limbic system-associated membrane protein	Lsamp	5430428I19, AW046674, B130007O04Rik, D930023J12Rik, Lam, Lamp	-121.7kb	Anti-sense	Chr. 16 - 41532788 - 42181679 on NCBI Build GRCm38
Downstream	RIKEN cDNA 4932412D23 gene	4932412D23Rik	ENSMUSG00000075070, Gm10809	422.2kb	Sense	Chr. 16 - 42725702 - 42875762 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1600001626.mm.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Mus musculus, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1600013240.mm.1	TC1600001626.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600013240.mm.1	NR_105858.1	Refseq