Rn00437164_m1 Best Coverage

• Gene Symbol: Tnni3
• Gene Name: troponin I type 3 (cardiac)
• Gene Aliases: TnI, cTNI
• Chromosome Location: Chr.1: 72882806 - 72886490 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tnni3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017144.2	NP_058840.1	7 - 8	657		67
GenBank mRNA	DQ062462.1	-	5 - 6	553		67
	M57679.1	-	7 - 8	640		67
	X58499.1	-	7 - 8	658		67

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100000868.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, Rat Tumor Metastasis Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tnni3

Gene Ontology Categories:

Process(es)

vasculogenesis
regulation of systemic arterial blood pressure by ischemic conditions
cellular calcium ion homeostasis
regulation of muscle contraction
regulation of smooth muscle contraction
striated muscle contraction
heart development
negative regulation of ATPase activity
ventricular cardiac muscle tissue morphogenesis
heart contraction
cardiac muscle contraction

Function(s)

actin binding
calcium channel inhibitor activity
protein kinase binding
protein domain specific binding
troponin C binding
troponin T binding
metal ion binding
calcium-dependent protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P676553	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P676553	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P676553	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P676553	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P676553	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700373796	-	-
Agilent Rat cDNA Microarray (G4105A)	700373796	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10704067	-	-
Affymetrix Rat Gene 1.0 ST Array	10704065	-	-
Affymetrix Rat Gene 1.0 ST Array	10704066	-	-
Affymetrix Rat Gene 1.0 ST Array	10704064	-	-
Affymetrix Rat Gene 1.0 ST Array	10704063	-	-
Affymetrix Rat Gene 1.0 ST Array	10704068	-	-
Affymetrix Rat Gene 1.0 ST Array	10704069	-	-
Affymetrix Rat Gene 1.0 ST Array	10704070	-	-
Affymetrix Rat Gene 1.1 ST Array	10704062	-	-
Rat Genome 230 2.0 Array	1386931_at	-	-
Rat Genome 230 2.0 Array	1386931_PM_at	-	-
Affymetrix HT Rat Focus Array	1386931_PM_at	-	-
Affymetrix HT Rat Focus Array	1386931_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100005842.rn.1	TC0100000868.rn.1	RTA TC
Rat Expression Set 230	1386931_at	-	-
Rat Expression Set 230	1386931_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10704062	-	-
Rat Genome U34 Set	M92074_g_at	-	-
Rat Genome U34 Set	M92074_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21723497	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1372553	-	-
RatRef-12 Expression BeadChip	ILMN_66481	-	-