Rn00481788_g1 Best Coverage

• Gene Symbol: Cdip1
• Gene Name: cell death-inducing p53 target 1
• Gene Aliases: RGD1310686
• Chromosome Location: Chr.10: 10966814 - 10989937 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cdip1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001008360.1	NP_001008361.1	6 - 7	782		95
	XM_006245811.2	XP_006245873.1	5 - 6	793		95
	XM_006245812.2	XP_006245874.1	7 - 8	980		95
	XM_006245813.2	XP_006245875.1	6 - 7	1303		95
	XM_006245814.2	XP_006245876.1	6 - 7	906		95
	XM_006245815.2	XP_006245877.1	5 - 6	1229		95
	XM_006245816.2	XP_006245878.1	5 - 6	796		95
	XM_008767493.1	XP_008765715.1	5 - 6	2207		95
	XM_008767494.1	XP_008765716.1	5 - 6	2458		95
GenBank mRNA	BC085860.1	-	6 - 7	782	7190340	95

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000000139.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cdip1

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

apoptotic process
tumor necrosis factor-mediated signaling pathway
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P023315	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	861175	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	525315	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	661536	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	615638	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	820560	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	131866	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	158608	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	661407	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	694654	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	368380	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	421820	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	107840	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	16002	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	946974	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	79626	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	360238	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	297469	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	231888	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	491667	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	122904	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	7275	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	97805	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P023315	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P023315	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P023315	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P16562	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P103278	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	72370	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	496	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10731741	-	-
Affymetrix Rat Gene 1.0 ST Array	10731742	-	-
Affymetrix Rat Gene 1.0 ST Array	10731739	-	-
Affymetrix Rat Gene 1.0 ST Array	10731745	-	-
Affymetrix Rat Gene 1.0 ST Array	10731743	-	-
Affymetrix Rat Gene 1.0 ST Array	10731744	-	-
Affymetrix Rat Gene 1.0 ST Array	10731740	-	-
Affymetrix Rat Gene 1.1 ST Array	10731738	-	-
Rat Genome 230 2.0 Array	1374169_PM_at	-	-
Rat Genome 230 2.0 Array	1375674_PM_at	-	-
Rat Genome 230 2.0 Array	1375674_at	-	-
Rat Genome 230 2.0 Array	1374217_PM_at	-	-
Rat Genome 230 2.0 Array	1374169_at	-	-
Rat Genome 230 2.0 Array	1374217_at	-	-
Affymetrix HT Rat Focus Array	1374217_at	-	-
Affymetrix HT Rat Focus Array	1375674_at	-	-
Affymetrix HT Rat Focus Array	1374169_at	-	-
Affymetrix HT Rat Focus Array	1374217_PM_at	-	-
Affymetrix HT Rat Focus Array	1374169_PM_at	-	-
Affymetrix HT Rat Focus Array	1375674_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000001217.rn.1	TC1000000139.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000001216.rn.1	TC1000000139.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000001218.rn.1	TC1000000139.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000001219.rn.1	TC1000000139.rn.1	RTA TC
Rat Expression Set 230	1374169_at	-	-
Rat Expression Set 230	1374217_at	-	-
Rat Expression Set 230	1374217_PM_at	-	-
Rat Expression Set 230	1375674_PM_at	-	-
Rat Expression Set 230	1375674_at	-	-
Rat Expression Set 230	1374169_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10731738	-	-
Rat Genome U34 Set	rc_AI237618_at	-	-
Rat Genome U34 Set	rc_AI229382_f_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366519	-	-
RatRef-12 Expression BeadChip	ILMN_68582	-	-