Rn00482936_m1

• Gene Symbol: Calr
• Gene Name: calreticulin
• Gene Aliases: -
• Chromosome Location: Chr.19: 25956771 - 25961666 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Calr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022399.2	NP_071794.1	3 - 4	461		62
GenBank mRNA	BC062395.1	-	3 - 4	438	5623178	62
	BU671467.1	-	3 - 4	461		62
	D78308.1	-	3 - 4	413		62
	FQ210587.1	-		466		62
	FQ220096.1	-	3 - 4	467		62
	X53363.1	-	3 - 4	433		62
	X79327.1	-	3 - 4	411		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1900001210.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Calr

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
peptide antigen assembly with MHC class I protein complex
protein folding
protein export from nucleus
cell cycle arrest
spermatogenesis
positive regulation of cell proliferation
response to organic substance
positive regulation of gene expression
negative regulation of translation
cortical actin cytoskeleton organization
response to estradiol
negative regulation of intracellular steroid hormone receptor signaling pathway
response to testosterone
protein localization to nucleus
regulation of meiotic nuclear division
response to drug
negative regulation of neuron differentiation
positive regulation of DNA replication
positive regulation of cell cycle
negative regulation of transcription, DNA-templated
negative regulation of retinoic acid receptor signaling pathway
positive regulation of phagocytosis
protein stabilization
cardiac muscle cell differentiation
chaperone-mediated protein folding
cellular response to lithium ion
cellular response to organic substance
cellular senescence
positive regulation of substrate adhesion-dependent cell spreading
positive regulation of dendritic cell chemotaxis

Function(s)

glycoprotein binding
mRNA binding
integrin binding
iron ion binding
calcium ion binding
protein binding
carbohydrate binding
ubiquitin protein ligase binding
peptide binding
hormone binding
poly(A) RNA binding
androgen receptor binding
unfolded protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1900009836.rn.1	TC1900001210.rn.1	RTA TC