Rn00500505_m1

• Gene Symbol: Lcat
• Gene Name: lecithin cholesterol acyltransferase
• Gene Aliases: -
• Chromosome Location: Chr.19: 37913333 - 37916799 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Lcat
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017024.2	NP_058720.2	1 - 2	166		70
GenBank mRNA	BC091155.1	-	1 - 2	166	7370790	70
	FQ209624.1	-	1 - 2	181		70
	FQ218245.1	-	1 - 2	181		70
	FQ218883.1	-	1 - 2	184		70
	U62803.1	-	1 - 2	169		70
	X54096.1	-	1 - 2	180		70

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1900001745.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Lcat

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Process(es)

phospholipid metabolic process
phosphatidylcholine biosynthetic process
cholesterol metabolic process
cholesterol transport
very-low-density lipoprotein particle remodeling
high-density lipoprotein particle remodeling
cholesterol esterification
lipoprotein metabolic process
lipoprotein biosynthetic process
cholesterol homeostasis
reverse cholesterol transport
response to copper ion
response to glucocorticoid
regulation of high-density lipoprotein particle assembly

Function(s)

phosphatidylcholine-sterol O-acyltransferase activity
phospholipase A2 activity
apolipoprotein A-I binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P15264	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	66342	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	542545	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	641935	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	146604	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P15264	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P15264	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P15264	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P15264	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700525603	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	5308	-	-
Agilent Rat cDNA Microarray (G4105A)	700525603	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10810741	-	-
Affymetrix Rat Gene 1.0 ST Array	10810739	-	-
Affymetrix Rat Gene 1.0 ST Array	10810737	-	-
Affymetrix Rat Gene 1.0 ST Array	10810742	-	-
Affymetrix Rat Gene 1.0 ST Array	10810738	-	-
Affymetrix Rat Gene 1.0 ST Array	10810740	-	-
Affymetrix Rat Gene 1.1 ST Array	10810736	-	-
Rat Genome 230 2.0 Array	1367887_at	-	-
Rat Genome 230 2.0 Array	1367887_PM_at	-	-
Affymetrix HT Rat Focus Array	1367887_at	-	-
Affymetrix HT Rat Focus Array	1367887_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1900014033.rn.1	TC1900001745.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900014030.rn.1	TC1900001745.rn.1	RTA TC
Rat Expression Set 230	1367887_at	-	-
Rat Expression Set 230	1367887_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10810736	-	-
Rat Genome U34 Set	X54096_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21664296	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1367035	-	-
RatRef-12 Expression BeadChip	ILMN_67988	-	-