Rn00506029_m1 Best Coverage

• Gene Symbol: Slc6a8
• Gene Name: solute carrier family 6 (neurotransmitter transporter), member 8
• Gene Aliases: CHOT1, CHT1, CRT, CT1
• Chromosome Location: Chr.X: 157129987 - 157139322 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Slc6a8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017348.2	NP_059044.1	7 - 8	1729		65
	XM_006229611.1	XP_006229673.1	6 - 7	1626		65
GenBank mRNA	BC168238.1	-	7 - 8	1707		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00002649.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Slc6a8

Gene Ontology Categories:

Process(es)

sodium ion transport
neurotransmitter transport
choline transport
creatine transmembrane transport
embryonic brain development

Function(s)

creatine transmembrane transporter activity
creatine:sodium symporter activity
neurotransmitter:sodium symporter activity
choline transmembrane transporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P781006	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	706608	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	838488	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	665576	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	887626	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	617544	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	144856	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	133899	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P781006	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P781006	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P781006	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P781006	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P173019	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	532	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10935944	-	-
Affymetrix Rat Gene 1.0 ST Array	10935942	-	-
Affymetrix Rat Gene 1.0 ST Array	10935941	-	-
Affymetrix Rat Gene 1.0 ST Array	10935937	-	-
Affymetrix Rat Gene 1.0 ST Array	10935940	-	-
Affymetrix Rat Gene 1.0 ST Array	10935938	-	-
Affymetrix Rat Gene 1.0 ST Array	10935939	-	-
Affymetrix Rat Gene 1.0 ST Array	10935948	-	-
Affymetrix Rat Gene 1.0 ST Array	10935946	-	-
Affymetrix Rat Gene 1.0 ST Array	10935947	-	-
Affymetrix Rat Gene 1.0 ST Array	10935936	-	-
Affymetrix Rat Gene 1.0 ST Array	10935943	-	-
Affymetrix Rat Gene 1.0 ST Array	10935945	-	-
Affymetrix Rat Gene 1.1 ST Array	10935935	-	-
Rat Genome 230 2.0 Array	1367810_at	-	-
Rat Genome 230 2.0 Array	1386934_PM_at	-	-
Rat Genome 230 2.0 Array	1386934_at	-	-
Rat Genome 230 2.0 Array	1367810_PM_at	-	-
Affymetrix HT Rat Focus Array	1367810_PM_at	-	-
Affymetrix HT Rat Focus Array	1386934_at	-	-
Affymetrix HT Rat Focus Array	1367810_at	-	-
Affymetrix HT Rat Focus Array	1386934_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0X00016586.rn.1	TC0X00002649.rn.1	RTA TC
Rat Expression Set 230	1367810_at	-	-
Rat Expression Set 230	1367810_PM_at	-	-
Rat Expression Set 230	1386934_at	-	-
Rat Expression Set 230	1386934_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10935935	-	-
Rat Genome U34 Set	X66494_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21957982	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376744	-	-