Rn00549798_m1

• Gene Symbol: Celf3
• Gene Name: CUGBP, Elav-like family member 3
• Gene Aliases: RGD1563168, Tnrc4
• Chromosome Location: Chr.2: 195716360 - 195732872 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Celf3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001109190.2	NP_001102660.1	1 - 2	919		77
	XM_006232897.2	XP_006232959.1	1 - 2	845		77
	XM_006232898.2	XP_006232960.1	1 - 2	846		77
	XM_006232900.2	XP_006232962.1	1 - 2	845		77
	XM_006232902.2	XP_006232964.1	1 - 2	845		77
	XM_006232904.2	XP_006232966.1	2 - 3	2573		77
	XM_006232905.2	XP_006232967.1	2 - 3	2606		77
	XM_006232908.2	XP_006232970.1	1 - 2	843		77
	XM_008761322.1	XP_008759544.1	2 - 3	3160		77

More Information

Additional Information:

This assay is in the 5'UTR region of the XM_006232904.2, XM_006232905.2 transcripts.

• Set Membership: Amplicon length between 71 and 85, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

regulation of alternative mRNA splicing, via spliceosome
spermatogenesis
biological_process
RNA splicing
flagellated sperm motility
positive regulation of mRNA splicing, via spliceosome

Function(s)

nucleotide binding
molecular_function
RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0200011217.rn.1	TC0200001684.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200011216.rn.1	TC0200001684.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200011209.rn.1	TC0200001684.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200011215.rn.1	TC0200001684.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200011218.rn.1	TC0200001684.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200011219.rn.1	TC0200001684.rn.1	RTA TC