Rn00561082_m1 Best Coverage

• Gene Symbol: Cyp1a2
• Gene Name: cytochrome P450, family 1, subfamily a, polypeptide 2
• Gene Aliases: CYPD45, P-450d, RATCYPD45
• Chromosome Location: Chr.8: 62451360 - 62458244 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cyp1a2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012541.3	NP_036673.3	6 - 7	1296		68
GenBank mRNA	BC127476.1	-	6 - 7	1296	7373253	68
	FQ209607.1	-	5 - 6	724		68
	FQ210213.1	-	6 - 7	1302		68
	FQ210219.1	-	5 - 6	444		68
	K02422.1	-	5 - 6	1264		68
	M26127.1	-	5 - 6	453		68
	X01031.1	-	5 - 6	811		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800002637.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, P450, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cyp1a2

Gene Ontology Categories:

Process(es)

steroid catabolic process
cellular aromatic compound metabolic process
porphyrin-containing compound metabolic process
xenobiotic metabolic process
toxin biosynthetic process
toxin metabolic process
post-embryonic development
alkaloid metabolic process
response to organic substance
regulation of gene expression
response to organic cyclic compound
monoterpenoid metabolic process
drug metabolic process
dibenzo-p-dioxin metabolic process
lung development
response to estradiol
response to lipopolysaccharide
monocarboxylic acid metabolic process
response to immobilization stress
response to drug
drug catabolic process
exogenous drug catabolic process
cellular respiration
heterocycle metabolic process
hydrogen peroxide biosynthetic process
oxidation-reduction process
oxidative demethylation
cellular response to cadmium ion
oxidative deethylation

Function(s)

monooxygenase activity
iron ion binding
oxidoreductase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
enzyme binding
heme binding
demethylase activity
caffeine oxidase activity
aromatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P711139	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	801271	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	694814	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	266009	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	175188	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P711139	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P711139	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P711139	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P711139	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P142025	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701193624	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	39286	-	-
Agilent Rat cDNA Microarray (G4105A)	701193624	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10917812	-	-
Affymetrix Rat Gene 1.0 ST Array	10917813	-	-
Affymetrix Rat Gene 1.0 ST Array	10917809	-	-
Affymetrix Rat Gene 1.0 ST Array	10917810	-	-
Affymetrix Rat Gene 1.1 ST Array	10917808	-	-
Rat Genome 230 2.0 Array	1387243_at	-	-
Rat Genome 230 2.0 Array	1387243_PM_at	-	-
Affymetrix HT Rat Focus Array	1387243_PM_at	-	-
Affymetrix HT Rat Focus Array	1387243_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800021388.rn.1	TC0800002637.rn.1	RTA TC
Rat Expression Set 230	1387243_PM_at	-	-
Rat Expression Set 230	1387243_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10917808	-	-
Rat Genome U34 Set	E01184cds_s_at	-	-
Rat Genome U34 Set	M26127_s_at	-	-
Rat Genome U34 Set	K03241cds_s_at	-	-
Rat Genome U34 Set	M26127_s_at	-	-
Rat Genome U34 Set	K03241cds_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21061685	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1350207	-	-
RatRef-12 Expression BeadChip	ILMN_59403	-	-