Rn00562164_m1 Best Coverage

• Gene Symbol: Cckar
• Gene Name: cholecystokinin A receptor
• Gene Aliases: Cck-ar
• Chromosome Location: Chr.14: 59610951 - 59621856 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cckar
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012688.3	NP_036820.1	3 - 4	819		64
	XM_008770188.1	XP_008768410.1	4 - 5	1003		64
GenBank mRNA	M88096.1	-	3 - 4	823		64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400000616.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, G-protein coupled receptor, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cckar

Gene Ontology Categories:

Process(es)

temperature homeostasis
gastric acid secretion
neuron migration
reduction of food intake in response to dietary excess
positive regulation of cytosolic calcium ion concentration
axonogenesis
response to nutrient
feeding behavior
response to radiation
response to heat
insulin secretion
pancreatic juice secretion
forebrain development
pancreas development
animal organ regeneration
actin cytoskeleton reorganization
response to lipopolysaccharide
cellular response to hormone stimulus
cholecystokinin signaling pathway
response to starvation
eating behavior
regulation of potassium ion transport
regulation of hormone secretion
response to steroid hormone
response to glucocorticoid
regulation of calcium ion transport
positive regulation of somatostatin secretion
response to peptide

Function(s)

cholecystokinin receptor activity
peptide binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P014929	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	55093	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	417262	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	933863	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	665190	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	178431	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	23337	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P014929	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P014929	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P014929	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P15402	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10940640	-	-
Affymetrix Rat Gene 1.1 ST Array	10940640	-	-
Rat Genome 230 2.0 Array	1387700_PM_at	-	-
Rat Genome 230 2.0 Array	1369787_PM_at	-	-
Rat Genome 230 2.0 Array	1387700_at	-	-
Rat Genome 230 2.0 Array	1369787_at	-	-
Affymetrix HT Rat Focus Array	1387700_PM_at	-	-
Affymetrix HT Rat Focus Array	1369787_at	-	-
Affymetrix HT Rat Focus Array	1387700_at	-	-
Affymetrix HT Rat Focus Array	1369787_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1400004415.rn.1	TC1400000616.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400004416.rn.1	TC1400000616.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400004410.rn.1	TC1400000616.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400004413.rn.1	TC1400000616.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400004411.rn.1	TC1400000616.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400004412.rn.1	TC1400000616.rn.1	RTA TC
Rat Expression Set 230	1387700_at	-	-
Rat Expression Set 230	1387700_PM_at	-	-
Rat Expression Set 230	1369787_PM_at	-	-
Rat Expression Set 230	1369787_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10940640	-	-
Rat Genome U34 Set	D50608_at	-	-
Rat Genome U34 Set	E12743exon_s_at	-	-
Rat Genome U34 Set	E12746cds_s_at	-	-
Rat Genome U34 Set	E12742exon_s_at	-	-
Rat Genome U34 Set	E12742exon_s_at	-	-
Rat Genome U34 Set	E12743exon_s_at	-	-
Rat Genome U34 Set	E12746cds_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20787845	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1350836	-	-
RatRef-12 Expression BeadChip	ILMN_68836	-	-