Rn00562332_m1 Best Coverage

• Gene Symbol: Slc16a1
• Gene Name: solute carrier family 16 (monocarboxylate transporter), member 1
• Gene Aliases: MCT1, RATMCT1, RNMCT1
• Chromosome Location: Chr.2: 207108552 - 207128561 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Slc16a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012716.2	NP_036848.1	3 - 4	550		77
GenBank mRNA	BC078877.1	-	3 - 4	550	7122399	77
	D63834.1	-		564		77
	X86216.1	-		570		77

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001912.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Slc16a1

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

lipid metabolic process
response to food
lactate transmembrane transport
plasma membrane lactate transport
glucose homeostasis
regulation of insulin secretion
centrosome organization
behavioral response to nutrient
cellular response to organic cyclic compound

Function(s)

protein binding
lactate transmembrane transporter activity
symporter activity
secondary active monocarboxylate transmembrane transporter activity
protein homodimerization activity
organic cyclic compound binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P086969	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	335014	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	905100	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	891197	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	238495	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	921791	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	928957	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	174373	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	576009	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	705804	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	171501	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	62386	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	913454	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	95027	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	195693	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	58823	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	153354	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P086969	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P086969	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P086969	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P545426	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700253737	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	52835	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	76587	-	-
Agilent Rat cDNA Microarray (G4105A)	700253737	-	-
Agilent Rat cDNA Microarray (G4105A)	700462868	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10818094	-	-
Affymetrix Rat Gene 1.0 ST Array	10818095	-	-
Affymetrix Rat Gene 1.0 ST Array	10818091	-	-
Affymetrix Rat Gene 1.0 ST Array	10818092	-	-
Affymetrix Rat Gene 1.0 ST Array	10818093	-	-
Affymetrix Rat Gene 1.0 ST Array	10818096	-	-
Affymetrix Rat Gene 1.1 ST Array	10818090	-	-
Rat Genome 230 2.0 Array	1380467_PM_at	-	-
Rat Genome 230 2.0 Array	1397803_at	-	-
Rat Genome 230 2.0 Array	1386981_at	-	-
Rat Genome 230 2.0 Array	1380467_at	-	-
Rat Genome 230 2.0 Array	1386981_PM_at	-	-
Rat Genome 230 2.0 Array	1397803_PM_at	-	-
Affymetrix HT Rat Focus Array	1380467_at	-	-
Affymetrix HT Rat Focus Array	1386981_at	-	-
Affymetrix HT Rat Focus Array	1386981_PM_at	-	-
Affymetrix HT Rat Focus Array	1380467_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200013071.rn.1	TC0200001912.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013074.rn.1	TC0200001912.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013076.rn.1	TC0200001912.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013077.rn.1	TC0200001912.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200013073.rn.1	TC0200001912.rn.1	RTA TC
Rat Expression Set 230	1386981_at	-	-
Rat Expression Set 230	1386981_PM_at	-	-
Rat Expression Set 230	1380467_PM_at	-	-
Rat Expression Set 230	1380467_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10818090	-	-
Rat Genome U34 Set	rc_AI145680_s_at	-	-
Rat Genome U34 Set	D63834_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21184793	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355191	-	-
RatRef-12 Expression BeadChip	ILMN_55995	-	-