Rn00562482_m1 Best Coverage

• Gene Symbol: Apoa4
• Gene Name: apolipoprotein A-IV
• Gene Aliases: Apo-AIV, ApoA-IV, apoAIV
• Chromosome Location: Chr.8: 50536983 - 50539371 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apoa4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012737.1	NP_036869.1	2 - 3	262		63
GenBank mRNA	BC091159.1	-	2 - 3	237	7373033	63
	FQ218620.1	-	2 - 3	263		63
	M00002.1	-	2 - 3	262		63

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800000621.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoa4

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Process(es)

innate immune response in mucosa
cholesterol biosynthetic process
lipid transport
response to lipid hydroperoxide
leukocyte cell-cell adhesion
cholesterol metabolic process
positive regulation of cholesterol esterification
positive regulation of triglyceride catabolic process
peripheral nervous system axon regeneration
removal of superoxide radicals
regulation of intestinal cholesterol absorption
response to food
regulation of cholesterol transport
cholesterol efflux
phospholipid efflux
response to triglyceride
very-low-density lipoprotein particle remodeling
high-density lipoprotein particle assembly
negative regulation of plasma lipoprotein particle oxidation
lipoprotein metabolic process
cholesterol homeostasis
hydrogen peroxide catabolic process
reverse cholesterol transport
multicellular organism lipid catabolic process
positive regulation of fatty acid biosynthetic process
phosphatidylcholine metabolic process
positive regulation of lipoprotein lipase activity
lipid homeostasis
protein-lipid complex assembly
triglyceride homeostasis

Function(s)

copper ion binding
lipid binding
cholesterol binding
antioxidant activity
cholesterol transporter activity
phosphatidylcholine binding
protein homodimerization activity
phosphatidylcholine-sterol O-acyltransferase activator activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1030225	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1030225	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1030225	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1030225	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1030225	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10909726	-	-
Affymetrix Rat Gene 1.1 ST Array	10909724	-	-
Rat Genome 230 2.0 Array	1368520_PM_at	-	-
Rat Genome 230 2.0 Array	1368520_at	-	-
Affymetrix HT Rat Focus Array	1368520_PM_at	-	-
Affymetrix HT Rat Focus Array	1368520_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800004030.rn.1	TC0800000621.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800004032.rn.1	TC0800000621.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800004031.rn.1	TC0800000621.rn.1	RTA TC
Rat Expression Set 230	1368520_PM_at	-	-
Rat Expression Set 230	1368520_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10909724	-	-
Rat Genome U34 Set	M00002_at	-	-
Rat Genome U34 Set	rc_AA894148_s_at	-	-
Rat Genome U34 Set	rc_AI113166_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21368086	-	-