Rn00563091_g1 Best Coverage

• Gene Symbol: Cox6a2
• Gene Name: cytochrome c oxidase subunit VIa polypeptide 2
• Gene Aliases: COX6AH
• Chromosome Location: Chr.1: 199624037 - 199626255 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cox6a2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012812.3	NP_036944.2	2 - 3	275		87
	NR_037674.1		2 - 3	232		87
	XM_006230218.1	XP_006230280.1	3 - 4	324		87
GenBank mRNA	BM392424.1	-	1 - 2			87
	BQ782641.1	-	1 - 2			87
	FM058713.1	-	3 - 4	329		87
	FM121690.1	-	2 - 3	181		87
	FQ217951.1	-	2 - 3	225		87
	FQ217987.1	-	2 - 3	182		87
	FQ223608.1	-	2 - 3	231		87
	FQ224015.1	-	2 - 3	233		87
	FQ224467.1	-	2 - 3	221		87
	FQ224572.1	-	2 - 3	240		87
	X12554.1	-	2 - 3	196		87

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006733.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cox6a2

Gene Ontology Categories:

Process(es)

proton transmembrane transport

Function(s)

cytochrome-c oxidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P003764	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P003764	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P003764	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P003764	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P819964	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700437485	-	-
Agilent Rat cDNA Microarray (G4105A)	700437485	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10726115	-	-
Affymetrix Rat Gene 1.0 ST Array	10726117	-	-
Affymetrix Rat Gene 1.0 ST Array	10726116	-	-
Affymetrix Rat Gene 1.1 ST Array	10726114	-	-
Rat Genome 230 2.0 Array	1367782_PM_at	-	-
Rat Genome 230 2.0 Array	1367782_at	-	-
Affymetrix HT Rat Focus Array	1367782_PM_at	-	-
Affymetrix HT Rat Focus Array	1367782_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100053126.rn.1	TC0100006733.rn.1	RTA TC
Rat Expression Set 230	1367782_at	-	-
Rat Expression Set 230	1367782_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10726114	-	-
Rat Genome U34 Set	X72758mRNA_at	-	-
Rat Genome U34 Set	rc_AI171644_s_at	-	-
Rat Genome U34 Set	X12554cds_s_at	-	-
Rat Genome U34 Set	rc_AI171644_s_at	-	-
Rat Genome U34 Set	X12554cds_s_at	-	-
Rat Genome U34 Set	X72758mRNA_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21240731	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1373354	-	-
RatRef-12 Expression BeadChip	ILMN_55404	-	-