Rn00564227_m1 Best Coverage

• Gene Symbol: Icam1
• Gene Name: intercellular adhesion molecule 1
• Gene Aliases: CD54, ICAM
• Chromosome Location: Chr.8: 22035287 - 22047049 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Icam1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012967.1	NP_037099.1	1 - 2	103		61
GenBank mRNA	BC081837.1	-	1 - 2	115	7122397	61
	D00913.1	-	1 - 2	103		61
	FQ228241.1	-	1 - 2	123		61

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800000214.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Rat Inflammation, 1700, Inventoried, Rat_Inflammation, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Icam1

Gene Ontology Categories:

Process(es)

ovarian follicle development
response to hypoxia
response to amphetamine
T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell
acute inflammatory response to antigenic stimulus
T cell antigen processing and presentation
positive regulation of cellular extravasation
cell adhesion
leukocyte cell-cell adhesion
cell aging
sensory perception of sound
regulation of cell shape
response to ionizing radiation
response to sulfur dioxide
response to organic cyclic compound
single organismal cell-cell adhesion
membrane to membrane docking
regulation of cell adhesion
positive regulation of actin filament polymerization
cellular response to nutrient levels
response to lipopolysaccharide
cell adhesion mediated by integrin
response to gonadotropin
response to drug
response to amino acid
positive regulation of GTPase activity
adhesion of symbiont to host
positive regulation of nitric oxide biosynthetic process
response to ethanol
positive regulation of vasoconstriction
response to copper ion
receptor-mediated virion attachment to host cell
positive regulation of peptidyl-tyrosine phosphorylation
leukocyte migration
positive regulation of NF-kappaB transcription factor activity
negative regulation of calcium ion transport
establishment of endothelial barrier
positive regulation of ERK1 and ERK2 cascade
cellular response to lipopolysaccharide
cellular response to organic substance
cellular response to alkaloid
cellular response to glucose stimulus
cellular response to interleukin-1
cellular response to tumor necrosis factor
cellular response to hypoxia
establishment of Sertoli cell barrier
regulation of ruffle assembly
negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
negative regulation of endothelial cell apoptotic process

Function(s)

integrin binding
protein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P15253	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	799485	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	133787	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	945408	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	741368	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	742111	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	85105	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	334590	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	723697	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	1888	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P15253	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P15253	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P15253	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P15253	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	12194	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10908321	-	-
Affymetrix Rat Gene 1.0 ST Array	10908324	-	-
Affymetrix Rat Gene 1.0 ST Array	10908323	-	-
Affymetrix Rat Gene 1.0 ST Array	10908325	-	-
Affymetrix Rat Gene 1.0 ST Array	10908322	-	-
Affymetrix Rat Gene 1.0 ST Array	10908320	-	-
Affymetrix Rat Gene 1.0 ST Array	10908327	-	-
Affymetrix Rat Gene 1.0 ST Array	10908326	-	-
Affymetrix Rat Gene 1.1 ST Array	10908319	-	-
Rat Genome 230 2.0 Array	1387202_at	-	-
Rat Genome 230 2.0 Array	1387202_PM_at	-	-
Affymetrix HT Rat Focus Array	1387202_at	-	-
Affymetrix HT Rat Focus Array	1387202_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800001130.rn.1	TC0800000214.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800001126.rn.1	TC0800000214.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800001127.rn.1	TC0800000214.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800001131.rn.1	TC0800000214.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800001125.rn.1	TC0800000214.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800001132.rn.1	TC0800000214.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800001128.rn.1	TC0800000214.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800001129.rn.1	TC0800000214.rn.1	RTA TC
Rat Expression Set 230	1387202_at	-	-
Rat Expression Set 230	1387202_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10908319	-	-
Rat Genome U34 Set	D00913_at	-	-
Rat Genome U34 Set	D00913_g_at	-	-
Rat Genome U34 Set	D00913_g_at	-	-
Rat Genome U34 Set	D00913_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21010672	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1354506	-	-
RatRef-12 Expression BeadChip	ILMN_61139	-	-