Slc6a4
Genomic Map
Back To TopAssay Details
| Gene Symbol: Slc6a4 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_013034.4 | NP_037166.2 | 7 - 8 | 1307 | 79 | |
| XM_008767950.1 | XP_008766172.1 | 8 - 9 | 1363 | 79 | ||
| GenBank mRNA | M79450.1 | - | 9 - 10 | 1431 | 79 | |
| X63253.1 | - | 7 - 8 | 1315 | 79 | ||
| X63995.1 | - | 8 - 9 | 1360 | 79 | ||
| Y11024.1 | - | 7 - 8 | 1200 | 79 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1000003270.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
response to hypoxia
serotonin transport
brain development
response to nutrient
memory
circadian rhythm
locomotory behavior
response to xenobiotic stimulus
response to toxic substance
response to organic substance
positive regulation of gene expression
monoamine transport
thalamus development
negative regulation of cerebellar granule cell precursor proliferation
negative regulation of synaptic transmission, dopaminergic
response to estradiol
social behavior
vasoconstriction
sperm ejaculation
negative regulation of neuron differentiation
positive regulation of cell cycle
negative regulation of organ growth
brain morphogenesis
protein complex oligomerization
protein homooligomerization
serotonin uptake
transmembrane transport
cellular response to retinoic acid
cellular response to organic substance
cellular response to cGMP
serotonin:sodium symporter activity
protein binding
monoamine transmembrane transporter activity
myosin binding
syntaxin-1 binding
cocaine binding
protein homodimerization activity
nitric-oxide synthase binding
actin filament binding
response to hypoxia
serotonin transport
brain development
response to nutrient
memory
circadian rhythm
locomotory behavior
response to xenobiotic stimulus
response to toxic substance
response to organic substance
positive regulation of gene expression
monoamine transport
thalamus development
negative regulation of cerebellar granule cell precursor proliferation
negative regulation of synaptic transmission, dopaminergic
response to estradiol
social behavior
vasoconstriction
sperm ejaculation
negative regulation of neuron differentiation
positive regulation of cell cycle
negative regulation of organ growth
brain morphogenesis
protein complex oligomerization
protein homooligomerization
serotonin uptake
transmembrane transport
cellular response to retinoic acid
cellular response to organic substance
cellular response to cGMP
serotonin:sodium symporter activity
protein binding
monoamine transmembrane transporter activity
myosin binding
syntaxin-1 binding
cocaine binding
protein homodimerization activity
nitric-oxide synthase binding
actin filament binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P477866 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 568880 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 269253 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385314 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 635840 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 963279 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 31177 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 451227 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385516 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 244164 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 473429 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 266282 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 757401 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 899236 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 696306 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 46307 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 461352 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 840837 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 411690 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 816945 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 296501 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 235684 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 466052 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 839843 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 401138 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 536018 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 52484 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 79899 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 9473 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 40239 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P477866 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P477866 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P477866 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P477871 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P477866 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 702212278 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 701092371 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 42199 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 101663 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 17299 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 701092371 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 702212278 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10745446 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745443 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745454 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745455 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745452 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745440 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745450 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745444 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745447 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745449 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745448 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745451 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745453 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745441 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745439 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745442 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745445 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10745438 | - | - |
| Rat Genome 230 2.0 Array | 1368348_at | - | - |
| Rat Genome 230 2.0 Array | 1368348_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368348_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368348_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1000029278.rn.1 | TC1000003270.rn.1 | RTA TC |
| Rat Expression Set 230 | 1368348_PM_at | - | - |
| Rat Expression Set 230 | 1368348_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10745438 | - | - |
| Rat Genome U34 Set | X63253cds_s_at | - | - |
| Rat Genome U34 Set | X63995_at | - | - |
| Rat Genome U34 Set | X63253cds_s_at | - | - |
| Rat Genome U34 Set | X63995_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21559857 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1355450 | - | - |
| RatRef-12 Expression BeadChip | ILMN_68506 | - | - |
Back To Top