Rn00565052_m1 Best Coverage

• Gene Symbol: Rpn1
• Gene Name: ribophorin I
• Gene Aliases: RIBI, RPN-I
• Chromosome Location: Chr.4: 119997268 - 120018679 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rpn1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	AB100593.1	-	2 - 3	325		87
	AB100594.1	-	2 - 3	325		87
	BC061756.1	-	2 - 3	329	5600029	87
	X05300.1	-	2 - 3	330		87

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400001356.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

glycosyltransferase

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P674598	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P674598	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P674598	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P674598	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P463557	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P674598	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700514522	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	41639	-	-
Agilent Rat cDNA Microarray (G4105A)	700514522	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10867050	-	-
Affymetrix Rat Gene 1.0 ST Array	10867057	-	-
Affymetrix Rat Gene 1.0 ST Array	10867056	-	-
Affymetrix Rat Gene 1.0 ST Array	10867053	-	-
Affymetrix Rat Gene 1.0 ST Array	10867051	-	-
Affymetrix Rat Gene 1.0 ST Array	10867058	-	-
Affymetrix Rat Gene 1.0 ST Array	10867059	-	-
Affymetrix Rat Gene 1.0 ST Array	10867054	-	-
Affymetrix Rat Gene 1.0 ST Array	10867055	-	-
Affymetrix Rat Gene 1.0 ST Array	10867052	-	-
Affymetrix Rat Gene 1.1 ST Array	10867049	-	-
Rat Genome 230 2.0 Array	1398766_at	-	-
Rat Genome 230 2.0 Array	1398766_PM_at	-	-
Affymetrix HT Rat Focus Array	1398766_PM_at	-	-
Affymetrix HT Rat Focus Array	1398766_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400009678.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009676.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009671.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009674.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009673.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009677.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009675.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009679.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009670.rn.1	TC0400001356.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009672.rn.1	TC0400001356.rn.1	RTA TC
Rat Expression Set 230	1398766_PM_at	-	-
Rat Expression Set 230	1398766_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10867049	-	-
Rat Genome U34 Set	X05300_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21341311	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1354402	-	-
RatRef-12 Expression BeadChip	ILMN_53613	-	-