Rn00565308_m1

• Gene Symbol: Vamp1
• Gene Name: vesicle-associated membrane protein 1
• Gene Aliases: Syb1
• Chromosome Location: Chr.4: 157726740 - 157733644 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vamp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013090.2	NP_037222.2	1 - 2	140		70
GenBank mRNA	BC092206.1	-	1 - 2	38	7313343	70
	CB582258.1	-	1 - 2	140		70
	CO567426.1	-		169		70
	EF653274.1	-	1 - 2	65		70
	EF653275.1	-	1 - 2	65		70
	M24104.1	-	1 - 2	103		70
	U74621.1	-	1 - 2	38		70

More Information

Additional Information:

This assay is in the 5'UTR region of the BC092206.1, EF653274.1, EF653275.1, M24104.1, NM_013090.2, U74621.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vamp1

Gene Ontology Categories:

Process(es)

intracellular protein transport
exocytosis
vesicle fusion
neurotransmitter secretion
vesicle-mediated transport
SNARE complex assembly

Function(s)

SNARE binding
SNAP receptor activity
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P560781	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P022586	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	25671	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	465887	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	250581	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	739561	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	408290	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	92652	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	160778	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P560781	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P022586	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P022586	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P560781	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P560781	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P022586	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P320894	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P11707	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702160547	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700526126	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	18479	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	102629	-	-
Agilent Rat cDNA Microarray (G4105A)	700526126	-	-
Agilent Rat cDNA Microarray (G4105A)	702160547	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10858860	-	-
Affymetrix Rat Gene 1.0 ST Array	10858863	-	-
Affymetrix Rat Gene 1.0 ST Array	10858869	-	-
Affymetrix Rat Gene 1.0 ST Array	10858859	-	-
Affymetrix Rat Gene 1.0 ST Array	10858864	-	-
Affymetrix Rat Gene 1.0 ST Array	10858866	-	-
Affymetrix Rat Gene 1.0 ST Array	10858868	-	-
Affymetrix Rat Gene 1.0 ST Array	10858861	-	-
Affymetrix Rat Gene 1.0 ST Array	10858862	-	-
Affymetrix Rat Gene 1.0 ST Array	10858867	-	-
Affymetrix Rat Gene 1.0 ST Array	10858870	-	-
Affymetrix Rat Gene 1.0 ST Array	10858865	-	-
Affymetrix Rat Gene 1.1 ST Array	10858858	-	-
Rat Genome 230 2.0 Array	1370556_at	-	-
Rat Genome 230 2.0 Array	1373510_PM_at	-	-
Rat Genome 230 2.0 Array	1387519_PM_at	-	-
Rat Genome 230 2.0 Array	1373510_at	-	-
Rat Genome 230 2.0 Array	1387519_at	-	-
Rat Genome 230 2.0 Array	1370556_PM_at	-	-
Affymetrix HT Rat Focus Array	1373510_at	-	-
Affymetrix HT Rat Focus Array	1370556_at	-	-
Affymetrix HT Rat Focus Array	1387519_at	-	-
Affymetrix HT Rat Focus Array	1373510_PM_at	-	-
Affymetrix HT Rat Focus Array	1387519_PM_at	-	-
Affymetrix HT Rat Focus Array	1370556_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400013107.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013111.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013117.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013113.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013118.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013119.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013109.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013122.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013112.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013120.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013121.rn.1	TC0400001792.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400013110.rn.1	TC0400001792.rn.1	RTA TC
Rat Expression Set 230	1387519_at	-	-
Rat Expression Set 230	1370556_at	-	-
Rat Expression Set 230	1387519_PM_at	-	-
Rat Expression Set 230	1370556_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10858858	-	-
Rat Genome U34 Set	M24104_at	-	-
Rat Genome U34 Set	M24104_g_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20716979	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357688	-	-
RatRef-12 Expression BeadChip	ILMN_48442	-	-