Rn00566700_m1 Best Coverage

• Gene Symbol: Il1a
• Gene Name: interleukin 1 alpha
• Gene Aliases: IL-1 alpha
• Chromosome Location: Chr.3: 121824712 - 121836122 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Il1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017019.1	NP_058715.1	6 - 7	682		73
GenBank mRNA	AJ245642.1	-	6 - 7	646		73
	AJ245643.1	-	4 - 5	447		73
	D00403.1	-	6 - 7	682		73

More Information

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, Rat Chemokine Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Il1a

Panther Classification:

Molecular Function -

interleukin superfamily

Gene Ontology Categories:

Process(es)

fever generation
response to hypoxia
connective tissue replacement involved in inflammatory response wound healing
acute inflammatory response
inflammatory response
immune response
spermatogenesis
heart development
negative regulation of cell proliferation
response to heat
response to organic substance
response to ozone
response to organonitrogen compound
response to gamma radiation
positive regulation of vascular endothelial growth factor production
positive regulation of steroid biosynthetic process
response to organic cyclic compound
cytokine-mediated signaling pathway
keratinization
positive regulation of prostaglandin secretion
response to lipopolysaccharide
positive regulation of interleukin-6 production
positive regulation of stress-activated MAPK cascade
response to L-ascorbic acid
cellular response to heat
ectopic germ cell programmed cell death
wound healing
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of interleukin-2 biosynthetic process
positive regulation of angiogenesis
positive regulation of mitotic nuclear division
positive regulation of transcription from RNA polymerase II promoter
positive regulation of JNK cascade
response to copper ion
positive regulation of cytokine secretion
positive regulation of cell division
regulation of sensory perception of pain
positive regulation of ERK1 and ERK2 cascade
extrinsic apoptotic signaling pathway in absence of ligand
positive regulation of neutrophil migration

Function(s)

cytokine activity
interleukin-1 receptor binding
copper ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P641004	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P294838	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	626657	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	690176	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	588727	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	125289	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	575469	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	195463	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	488952	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	742227	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	106513	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P641004	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P294838	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P641004	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P294838	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P641004	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P294838	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P294838	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	82376	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	104796	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10849838	-	-
Affymetrix Rat Gene 1.0 ST Array	10849837	-	-
Affymetrix Rat Gene 1.0 ST Array	10849836	-	-
Affymetrix Rat Gene 1.0 ST Array	10849834	-	-
Affymetrix Rat Gene 1.0 ST Array	10849835	-	-
Affymetrix Rat Gene 1.0 ST Array	10849839	-	-
Affymetrix Rat Gene 1.0 ST Array	10849840	-	-
Affymetrix Rat Gene 1.1 ST Array	10849833	-	-
Rat Genome 230 2.0 Array	1371170_a_at	-	-
Rat Genome 230 2.0 Array	1368592_PM_at	-	-
Rat Genome 230 2.0 Array	1371170_PM_a_at	-	-
Rat Genome 230 2.0 Array	1368592_at	-	-
Affymetrix HT Rat Focus Array	1368592_PM_at	-	-
Affymetrix HT Rat Focus Array	1371170_a_at	-	-
Affymetrix HT Rat Focus Array	1368592_at	-	-
Affymetrix HT Rat Focus Array	1371170_PM_a_at	-	-
Rat Expression Set 230	1371170_PM_a_at	-	-
Rat Expression Set 230	1368592_PM_at	-	-
Rat Expression Set 230	1371170_a_at	-	-
Rat Expression Set 230	1368592_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10849833	-	-
Rat Genome U34 Set	D00403_at	-	-
Rat Genome U34 Set	E05489cds_s_at	-	-
Rat Genome U34 Set	D00403_g_at	-	-
Rat Genome U34 Set	E05489cds_s_at	-	-
Rat Genome U34 Set	D00403_at	-	-
Rat Genome U34 Set	D00403_g_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21400717	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1356880	-	-
RatRef-12 Expression BeadChip	ILMN_54689	-	-