Rn00567167_m1 Best Coverage

• Gene Symbol: Hsd11b1
• Gene Name: hydroxysteroid 11-beta dehydrogenase 1
• Gene Aliases: LRRGT00065
• Chromosome Location: Chr.13: 111946626 - 111996531 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hsd11b1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017080.2	NP_058776.2	4 - 5	842		80
	XM_006250471.2	XP_006250533.1	5 - 6	623		80
	XM_006250473.2	XP_006250535.1	5 - 6	658		80
GenBank mRNA	AF542063.1	-	3 - 4	442		80
	BC078865.1	-	4 - 5	663	7109256	80
	FQ209646.1	-	4 - 5	609		80
	FQ209829.1	-	4 - 5	609		80
	FQ210302.1	-	4 - 5	607		80
	FQ210563.1	-	4 - 5	607		80
	FQ210596.1	-	4 - 5	609		80
	FQ211059.1	-	4 - 5	606		80
	FQ211404.1	-	4 - 5	608		80
	FQ212763.1	-	4 - 5	610		80
	FQ214152.1	-	4 - 5	609		80
	FQ214397.1	-	5 - 6	665		80
	FQ218558.1	-	4 - 5	607		80
	FQ218584.1	-	4 - 5	609		80
	FQ219123.1	-	4 - 5	609		80
	FQ219241.1	-	4 - 5	608		80
	FQ219385.1	-	4 - 5	607		80
	FQ219394.1	-	4 - 5	607		80
	FQ219517.1	-	4 - 5	609		80
	FQ219567.1	-	4 - 5	618		80
	FQ219624.1	-	4 - 5	542		80
	FQ220122.1	-	4 - 5	607		80
	J05107.1	-	4 - 5	590		80

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300002245.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Rat Androgen Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hsd11b1

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

glucocorticoid biosynthetic process
glucocorticoid catabolic process
metabolic process
phthalate metabolic process
lung development
response to nutrient levels
regulation of pentose-phosphate shunt
oxidation-reduction process
cellular response to estradiol stimulus

Function(s)

11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity
steroid binding
oxidoreductase activity
NADP binding
11-beta-hydroxysteroid dehydrogenase (NADP+) activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1018957	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	333830	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	824009	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	943749	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	570008	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	854601	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	593521	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	704664	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	270502	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	151807	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	720812	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	441692	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	143448	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	836230	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	446533	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	213976	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	496864	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	603850	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	2746	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	105518	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	3877	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	51796	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1018957	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1018957	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1018957	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P426345	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1018957	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	19672	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	65967	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	29308	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	63228	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	42722	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10770803	-	-
Affymetrix Rat Gene 1.0 ST Array	10770801	-	-
Affymetrix Rat Gene 1.0 ST Array	10770806	-	-
Affymetrix Rat Gene 1.0 ST Array	10770798	-	-
Affymetrix Rat Gene 1.0 ST Array	10770804	-	-
Affymetrix Rat Gene 1.0 ST Array	10770802	-	-
Affymetrix Rat Gene 1.0 ST Array	10770805	-	-
Affymetrix Rat Gene 1.0 ST Array	10770800	-	-
Affymetrix Rat Gene 1.0 ST Array	10770797	-	-
Affymetrix Rat Gene 1.1 ST Array	10770795	-	-
Rat Genome 230 2.0 Array	1386953_at	-	-
Rat Genome 230 2.0 Array	1386953_PM_at	-	-
Affymetrix HT Rat Focus Array	1386953_PM_at	-	-
Affymetrix HT Rat Focus Array	1386953_at	-	-
Affymetrix Rat Clariom S Assay	PSR1300016028.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016026.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016030.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016032.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016033.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016025.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016036.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016034.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016038.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016037.rn.1	TC1300002245.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300016031.rn.1	TC1300002245.rn.1	RTA TC
Rat Expression Set 230	1386953_PM_at	-	-
Rat Expression Set 230	1386953_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10770795	-	-
Rat Genome U34 Set	rc_AI105448_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21812929	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369135	-	-
RatRef-12 Expression BeadChip	ILMN_52838	-	-