Rn00567311_m1 Best Coverage

• Gene Symbol: Ctsc
• Gene Name: cathepsin C
• Gene Aliases: CATC, DPP-I, DPPI
• Chromosome Location: Chr.1: 151918516 - 151949979 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ctsc
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017097.1	NP_058793.1	4 - 5	702		91
GenBank mRNA	D90404.1	-	4 - 5	702		91
	FQ218311.1	-		762		91

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100001975.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Protease, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctsc

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

T cell mediated cytotoxicity
proteolysis
apoptotic process
aging
response to organic substance
positive regulation of peptidase activity
positive regulation of proteolysis involved in cellular protein catabolic process
positive regulation of apoptotic signaling pathway

Function(s)

cysteine-type endopeptidase activity
serine-type endopeptidase activity
cysteine-type peptidase activity
peptidase activator activity involved in apoptotic process
phosphatase binding
chloride ion binding
identical protein binding
protein self-association
chaperone binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P11819	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	344140	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	132350	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	737623	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	831357	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	127368	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	707109	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	586835	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	774529	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	576548	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	748207	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	786497	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	17707	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	235795	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	575039	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	910359	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	106200	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	659240	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	637268	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	378450	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	672706	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	146686	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	12543	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	453090	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	78181	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	12196	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	41114	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	105372	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	79832	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	72459	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P11819	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P11819	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P11819	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P11819	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	76800	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	33799	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	3078	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10708523	-	-
Affymetrix Rat Gene 1.0 ST Array	10708530	-	-
Affymetrix Rat Gene 1.0 ST Array	10708529	-	-
Affymetrix Rat Gene 1.0 ST Array	10708526	-	-
Affymetrix Rat Gene 1.0 ST Array	10708527	-	-
Affymetrix Rat Gene 1.0 ST Array	10708522	-	-
Affymetrix Rat Gene 1.0 ST Array	10708524	-	-
Affymetrix Rat Gene 1.0 ST Array	10708528	-	-
Affymetrix Rat Gene 1.1 ST Array	10708521	-	-
Rat Genome 230 2.0 Array	1374778_at	-	-
Rat Genome 230 2.0 Array	1368280_PM_at	-	-
Rat Genome 230 2.0 Array	1374778_PM_at	-	-
Rat Genome 230 2.0 Array	1368280_at	-	-
Affymetrix HT Rat Focus Array	1368280_PM_at	-	-
Affymetrix HT Rat Focus Array	1368280_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100015390.rn.1	TC0100001975.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100015388.rn.1	TC0100001975.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100015389.rn.1	TC0100001975.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100015391.rn.1	TC0100001975.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100015385.rn.1	TC0100001975.rn.1	RTA TC
Rat Expression Set 230	1374778_PM_at	-	-
Rat Expression Set 230	1374778_at	-	-
Rat Expression Set 230	1368280_at	-	-
Rat Expression Set 230	1368280_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10708521	-	-
Rat Genome U34 Set	D90404_g_at	-	-
Rat Genome U34 Set	D90404_at	-	-
Rat Genome U34 Set	rc_AA926360_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21660673	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1359951	-	-
RatRef-12 Expression BeadChip	ILMN_62796	-	-