Rn00567782_m1 Best Coverage

• Gene Symbol: Pla2g5
• Gene Name: phospholipase A2, group V
• Gene Aliases: -
• Chromosome Location: Chr.5: 157247608 - 157288716 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pla2g5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017174.1	NP_058870.1	3 - 4	406		73
	XM_006239139.2	XP_006239201.1	4 - 5	1205		73
	XM_006239140.2	XP_006239202.1	4 - 5	1784		73
	XM_006239141.2	XP_006239203.1	3 - 4	328		73
	XM_008764209.1	XP_008762431.1	5 - 6	1319		73
	XM_008764210.1	XP_008762432.1	3 - 4	2426		73
	XM_008764211.1	XP_008762433.1	2 - 3	441		73
GenBank mRNA	AY651028.1	-	3 - 4	273		73
	BC085745.1	-	3 - 4	431	7192819	73
	U03763.1	-	3 - 4	406		73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003911.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Rat Inflammation, 1700, Inventoried, Rat_Inflammation, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pla2g5

Panther Classification:

Molecular Function -

phospholipase

Gene Ontology Categories:

Process(es)

phospholipid metabolic process
platelet activating factor biosynthetic process
lipid catabolic process
leukotriene biosynthetic process
response to cytokine
arachidonic acid secretion
response to cAMP

Function(s)

phospholipase A2 activity
receptor binding
calcium ion binding
heparin binding
calcium-dependent phospholipase A2 activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P549075	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	720312	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	497092	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	910363	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	261466	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	180311	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	280966	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	946139	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	9972	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	187951	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	142293	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	955946	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	511943	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	173915	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	324023	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	959356	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	423761	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	15996	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P549075	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P549075	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P549075	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P549075	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P452300	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	66025	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	41593	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8680	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10880874	-	-
Affymetrix Rat Gene 1.0 ST Array	10880875	-	-
Affymetrix Rat Gene 1.0 ST Array	10880877	-	-
Affymetrix Rat Gene 1.0 ST Array	10880879	-	-
Affymetrix Rat Gene 1.0 ST Array	10880878	-	-
Affymetrix Rat Gene 1.0 ST Array	10880873	-	-
Affymetrix Rat Gene 1.0 ST Array	10880876	-	-
Affymetrix Rat Gene 1.1 ST Array	10880872	-	-
Rat Genome 230 2.0 Array	1370068_at	-	-
Rat Genome 230 2.0 Array	1370068_PM_at	-	-
Affymetrix HT Rat Focus Array	1370068_PM_at	-	-
Affymetrix HT Rat Focus Array	1370068_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500029387.rn.1	TC0500003911.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029393.rn.1	TC0500003911.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029388.rn.1	TC0500003911.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029389.rn.1	TC0500003911.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029391.rn.1	TC0500003911.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029399.rn.1	TC0500003911.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029385.rn.1	TC0500003911.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029392.rn.1	TC0500003911.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029390.rn.1	TC0500003911.rn.1	RTA TC
Rat Expression Set 230	1370068_at	-	-
Rat Expression Set 230	1370068_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10880872	-	-
Rat Genome U34 Set	U03763UTR#1_at	-	-
Rat Genome U34 Set	U03763UTR#1_g_at	-	-
Rat Genome U34 Set	U03763cds_at	-	-
Rat Genome U34 Set	rc_AI176489_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21816576	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1362771	-	-
RatRef-12 Expression BeadChip	ILMN_58717	-	-