Rn00567899_m1 Best Coverage

• Gene Symbol: Chrne
• Gene Name: cholinergic receptor, nicotinic, epsilon (muscle)
• Gene Aliases: -
• Chromosome Location: Chr.10: 57238960 - 57247632 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chrne
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017194.1	NP_058890.1	8 - 9	962		87
	XM_006246678.2	XP_006246740.1	9 - 10	1080		87
	XM_008767807.1	XP_008766029.1	9 - 10	1063		87
	XM_008767808.1	XP_008766030.1	10 - 11	1729		87
GenBank mRNA	X13252.1	-	8 - 9	962		87
	X74836.1	-	8 - 9	962		87

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003136.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Ion Channel, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chrne

Panther Classification:

Molecular Function -

ligand-gated ion channel

Gene Ontology Categories:

Process(es)

skeletal muscle contraction
cation transport
regulation of membrane potential
cation transmembrane transport

Function(s)

acetylcholine-activated cation-selective channel activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1035007	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	202103	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	178318	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1035007	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1035007	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1035007	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1035007	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10744476	-	-
Affymetrix Rat Gene 1.0 ST Array	10744474	-	-
Affymetrix Rat Gene 1.0 ST Array	10744482	-	-
Affymetrix Rat Gene 1.0 ST Array	10744473	-	-
Affymetrix Rat Gene 1.0 ST Array	10744478	-	-
Affymetrix Rat Gene 1.0 ST Array	10744479	-	-
Affymetrix Rat Gene 1.0 ST Array	10744483	-	-
Affymetrix Rat Gene 1.0 ST Array	10744475	-	-
Affymetrix Rat Gene 1.0 ST Array	10744477	-	-
Affymetrix Rat Gene 1.0 ST Array	10744480	-	-
Affymetrix Rat Gene 1.0 ST Array	10744481	-	-
Affymetrix Rat Gene 1.0 ST Array	10744484	-	-
Affymetrix Rat Gene 1.1 ST Array	10744472	-	-
Rat Genome 230 2.0 Array	1369137_PM_at	-	-
Rat Genome 230 2.0 Array	1369137_at	-	-
Affymetrix HT Rat Focus Array	1369137_PM_at	-	-
Affymetrix HT Rat Focus Array	1369137_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000028145.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028150.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028152.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028153.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028159.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028165.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028148.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028155.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028163.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028167.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028166.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028146.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028157.rn.1	TC1000003136.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000028161.rn.1	TC1000003136.rn.1	RTA TC
Rat Expression Set 230	1369137_PM_at	-	-
Rat Expression Set 230	1369137_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10744472	-	-
Rat Genome U34 Set	X74836cds_s_at	-	-
Rat Genome U34 Set	X74836cds_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21969810	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1359490	-	-
RatRef-12 Expression BeadChip	ILMN_64339	-	-