Rn00569848_m1

• Gene Symbol: Tlr4
• Gene Name: toll-like receptor 4
• Gene Aliases: -
• Chromosome Location: Chr.5: 82587424 - 82601056 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tlr4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019178.1	NP_062051.1	2 - 3	492		127
GenBank mRNA	AF057025.1	-	2 - 3	514		127
	EU929065.1	-	2 - 3	217		127
	GQ175880.1	-	2 - 3	492		127

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500000802.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Rattus norvegicus, Rat Chemokine Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tlr4

Gene Ontology Categories:

Process(es)

activation of MAPK activity
response to hypoxia
microglial cell activation
activation of innate immune response
toll-like receptor signaling pathway
B cell proliferation involved in immune response
nitric oxide production involved in inflammatory response
MyD88-dependent toll-like receptor signaling pathway
innate immune response-activating signal transduction
skeletal muscle contraction
leukotriene metabolic process
inflammatory response
response to oxidative stress
I-kappaB phosphorylation
response to bacterium
response to toxic substance
positive regulation of platelet activation
response to activity
immunoglobulin mediated immune response
positive regulation of B cell proliferation
lipopolysaccharide-mediated signaling pathway
response to lipopolysaccharide
detection of lipopolysaccharide
response to retinoic acid
response to progesterone
interferon-gamma production
negative regulation of interferon-gamma production
negative regulation of interleukin-17 production
negative regulation of interleukin-23 production
negative regulation of interleukin-6 production
negative regulation of tumor necrosis factor production
positive regulation of chemokine production
positive regulation of interferon-alpha production
positive regulation of interferon-beta production
positive regulation of interferon-gamma production
positive regulation of interleukin-1 production
positive regulation of interleukin-10 production
positive regulation of interleukin-12 production
positive regulation of interleukin-6 production
positive regulation of interleukin-8 production
positive regulation of tumor necrosis factor production
response to insulin
positive regulation of stress-activated MAPK cascade
toll-like receptor 4 signaling pathway
macrophage activation
positive regulation of NF-kappaB import into nucleus
positive regulation of tumor necrosis factor biosynthetic process
positive regulation of apoptotic process
positive regulation of I-kappaB kinase/NF-kappaB signaling
response to morphine
positive regulation of DNA binding
positive regulation of interleukin-12 biosynthetic process
innate immune response
positive regulation of MHC class II biosynthetic process
positive regulation of interferon-beta biosynthetic process
positive regulation of interleukin-8 biosynthetic process
positive regulation of nitric oxide biosynthetic process
response to ethanol
positive regulation of transcription from RNA polymerase II promoter
positive regulation of JNK cascade
positive regulation of lymphocyte proliferation
regulation of cytokine secretion
regulation of inflammatory response
positive regulation of inflammatory response
positive regulation of peptidyl-tyrosine phosphorylation
defense response to Gram-negative bacterium
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of NF-kappaB transcription factor activity
response to glucocorticoid
positive regulation of nitric-oxide synthase biosynthetic process
regulation of sensory perception of pain
intestinal epithelial structure maintenance
positive regulation of macrophage cytokine production
negative regulation of ERK1 and ERK2 cascade
positive regulation of ERK1 and ERK2 cascade
positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway
positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway
response to fatty acid
cellular response to lipopolysaccharide
cellular response to lipoteichoic acid
cellular response to mechanical stimulus
cellular response to retinoic acid
response to gold nanoparticle

Function(s)

lipopolysaccharide binding
lipopolysaccharide receptor activity
receptor activity
transmembrane signaling receptor activity
protein binding
phosphatidylinositol 3-kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P996124	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	632144	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	728095	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	574223	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	388520	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	811475	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	224208	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	345188	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	612232	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	522020	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	204987	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	526307	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	147288	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	91205	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	59946	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P996124	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P996124	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P996124	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P996124	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	60917	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10869538	-	-
Affymetrix Rat Gene 1.0 ST Array	10869536	-	-
Affymetrix Rat Gene 1.0 ST Array	10869537	-	-
Affymetrix Rat Gene 1.1 ST Array	10869535	-	-
Rat Genome 230 2.0 Array	1387982_at	-	-
Rat Genome 230 2.0 Array	1387982_PM_at	-	-
Affymetrix HT Rat Focus Array	1387982_at	-	-
Affymetrix HT Rat Focus Array	1387982_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500005378.rn.1	TC0500000802.rn.1	RTA TC
Rat Expression Set 230	1387982_PM_at	-	-
Rat Expression Set 230	1387982_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10869535	-	-
Rat Genome U34 Set	rc_AI030997_s_at	-	-
Rat Genome U34 Set	AF057025_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21139849	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1364385	-	-
RatRef-12 Expression BeadChip	ILMN_62916	-	-