Rn00570462_m1 Best Coverage

• Gene Symbol: Srsf5
• Gene Name: serine/arginine-rich splicing factor 5
• Gene Aliases: HRS, SRp40, Sfrs5
• Chromosome Location: Chr.6: 104610906 - 104615302 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Srsf5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001195505.1	NP_001182434.1		393		94
	NM_001195506.1	NP_001182435.1		264		94
	NM_019257.3	NP_062130.2		268		94
	XM_008764878.1	XP_008763100.1	2 - 3	444		94
	XM_008764879.1	XP_008763101.1	2 - 3	315		94
GenBank mRNA	AF020683.1	-	2 - 3	330		94
	BC058479.1	-		262	6920786	94
	FM049719.1	-	2 - 3	356		94
	FM059586.1	-	2 - 3	242		94
	FM081441.1	-	2 - 3	268		94
	L13635.1	-		364		94

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Srsf5

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA processing
RNA splicing
response to wounding
regulation of cell cycle

Function(s)

nucleotide binding
poly(A) RNA binding
RS domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P015902	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	181878	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	147776	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	627715	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P015902	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P015902	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P015902	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P346491	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P251692	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P515521	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700144409	-	-
Agilent Rat cDNA Microarray (G4105A)	700144409	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10885679	-	-
Affymetrix Rat Gene 1.0 ST Array	10885678	-	-
Affymetrix Rat Gene 1.0 ST Array	10885677	-	-
Affymetrix Rat Gene 1.0 ST Array	10885674	-	-
Affymetrix Rat Gene 1.0 ST Array	10885673	-	-
Affymetrix Rat Gene 1.0 ST Array	10885675	-	-
Affymetrix Rat Gene 1.0 ST Array	10885676	-	-
Affymetrix Rat Gene 1.0 ST Array	10859375	-	-
Affymetrix Rat Gene 1.1 ST Array	10859371	-	-
Affymetrix Rat Gene 1.1 ST Array	10885672	-	-
Rat Genome 230 2.0 Array	1368992_a_at	-	-
Rat Genome 230 2.0 Array	1368992_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1368992_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1368992_a_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600000981.rn.1	TC0600000161.rn.1	RTA TC
Rat Expression Set 230	1368992_PM_a_at	-	-
Rat Expression Set 230	1368992_a_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10885672	-	-
Rat Genome U34 Set	rc_AA955554_at	-	-
Rat Genome U34 Set	L13635_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21622658	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360269	-	-
RatRef-12 Expression BeadChip	ILMN_51867	-	-