Rn00570728_m1 Best Coverage

• Gene Symbol: Cdk1
• Gene Name: cyclin-dependent kinase 1
• Gene Aliases: Cdc2, Cdc2a
• Chromosome Location: Chr.20: 20576343 - 20591510 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cdk1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019296.1	NP_062169.1	7 - 8	891		76
	XM_006256353.2	XP_006256415.1	8 - 9	1018		76
GenBank mRNA	BC091549.1	-	8 - 9	976	7388690	76
	FQ227059.1	-	7 - 8	894		76
	X60767.1	-	7 - 8	891		76

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000542.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Protein Kinase, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cdk1

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

mitotic cell cycle
protein complex assembly
protein phosphorylation
apoptotic process
mitotic nuclear division
mitotic G2 DNA damage checkpoint
cell aging
response to toxic substance
response to organonitrogen compound
positive regulation of gene expression
response to organic cyclic compound
response to amine
response to activity
histone phosphorylation
peptidyl-serine phosphorylation
peptidyl-threonine phosphorylation
chromosome condensation
epithelial cell differentiation
organ regeneration
positive regulation of protein import into nucleus, translocation
protein localization to kinetochore
response to drug
response to hydrogen peroxide
negative regulation of apoptotic process
response to ethanol
positive regulation of DNA replication
positive regulation of mitotic cell cycle
response to cadmium ion
response to copper ion
response to axon injury
cell division
ventricular cardiac muscle cell development
positive regulation of cardiac muscle cell proliferation
cellular response to hydrogen peroxide

Function(s)

protein serine/threonine kinase activity
cyclin-dependent protein serine/threonine kinase activity
protein binding
ATP binding
RNA polymerase II carboxy-terminal domain kinase activity
kinase activity
cyclin binding
Hsp70 protein binding
histone kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P580844	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	212079	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	594375	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	856579	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	349591	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	342854	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	526232	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	459423	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	319558	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	786339	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	617786	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	227471	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	833334	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	76693	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	27189	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P580844	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P580844	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P580844	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P580844	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700948589	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701313344	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	12630	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	54637	-	-
Agilent Rat cDNA Microarray (G4105A)	701313344	-	-
Agilent Rat cDNA Microarray (G4105A)	700948589	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10829764	-	-
Affymetrix Rat Gene 1.0 ST Array	10829765	-	-
Affymetrix Rat Gene 1.0 ST Array	10829763	-	-
Affymetrix Rat Gene 1.0 ST Array	10829762	-	-
Affymetrix Rat Gene 1.0 ST Array	10829770	-	-
Affymetrix Rat Gene 1.0 ST Array	10829766	-	-
Affymetrix Rat Gene 1.0 ST Array	10829769	-	-
Affymetrix Rat Gene 1.0 ST Array	10829768	-	-
Affymetrix Rat Gene 1.0 ST Array	10829767	-	-
Affymetrix Rat Gene 1.1 ST Array	10829761	-	-
Rat Genome 230 2.0 Array	1367776_at	-	-
Rat Genome 230 2.0 Array	1367776_PM_at	-	-
Affymetrix HT Rat Focus Array	1367776_at	-	-
Affymetrix HT Rat Focus Array	1367776_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000005017.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005024.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005019.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005027.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005025.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005015.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005023.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005026.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005022.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005029.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005016.rn.1	TC2000000542.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000005020.rn.1	TC2000000542.rn.1	RTA TC
Rat Expression Set 230	1367776_at	-	-
Rat Expression Set 230	1367776_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10829761	-	-
Rat Genome U34 Set	X60767mRNA_s_at	-	-
Rat Genome U34 Set	X60767mRNA_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21187195	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358490	-	-
RatRef-12 Expression BeadChip	ILMN_58988	-	-