Rn00570936_m1 Best Coverage

• Gene Symbol: Nr4a2
• Gene Name: nuclear receptor subfamily 4, group A, member 2
• Gene Aliases: Nurr1
• Chromosome Location: Chr.3: 43110416 - 43119284 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nr4a2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019328.3	NP_062201.2	4 - 5	1267		104
	XM_006234201.2	XP_006234263.1	5 - 6	1485		104
	XM_008761861.1	XP_008760083.1	4 - 5	1401		104
GenBank mRNA	DQ092629.1	-	4 - 5	1198		104
	DQ092630.1	-	4 - 5	1034		104
	DQ092631.1	-	4 - 5	1212		104
	DQ092632.1	-	4 - 5	1202		104
	DQ092633.1	-	4 - 5	1034		104
	DQ092634.1	-	4 - 5	1034		104
	FQ222109.1	-	5 - 6	1507		104
	L08595.1	-	4 - 5	1264		104
	U01146.1	-	4 - 5	1198		104
	U72345.1	-	5 - 6	1491		104

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300003140.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Nuclear Receptor, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nr4a2

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Process(es)

response to hypoxia
neuron migration
response to amphetamine
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
nervous system development
adult locomotory behavior
post-embryonic development
response to inorganic substance
gene expression
regulation of gene expression
obsolete death
response to insecticide
central nervous system projection neuron axonogenesis
central nervous system neuron differentiation
habenula development
neuron differentiation
intracellular receptor signaling pathway
cellular response to extracellular stimulus
cellular response to oxidative stress
regulation of dopamine metabolic process
dopamine biosynthetic process
dopamine metabolic process
neuron maturation
positive regulation of catalytic activity
steroid hormone mediated signaling pathway
negative regulation of neuron apoptotic process
regulation of respiratory gaseous exchange
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
general adaptation syndrome
dopaminergic neuron differentiation

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
zinc ion binding
sequence-specific DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P154952	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P12023	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	575666	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	139953	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	750716	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	61554	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P154952	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12023	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P154952	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12023	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P154952	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P12023	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P522524	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	16801	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10845387	-	-
Affymetrix Rat Gene 1.0 ST Array	10845389	-	-
Affymetrix Rat Gene 1.0 ST Array	10845390	-	-
Affymetrix Rat Gene 1.0 ST Array	10845396	-	-
Affymetrix Rat Gene 1.0 ST Array	10845391	-	-
Affymetrix Rat Gene 1.0 ST Array	10845394	-	-
Affymetrix Rat Gene 1.0 ST Array	10845388	-	-
Affymetrix Rat Gene 1.0 ST Array	10845393	-	-
Affymetrix Rat Gene 1.0 ST Array	10845392	-	-
Affymetrix Rat Gene 1.0 ST Array	10845395	-	-
Affymetrix Rat Gene 1.0 ST Array	10845386	-	-
Affymetrix Rat Gene 1.0 ST Array	10845385	-	-
Affymetrix Rat Gene 1.1 ST Array	10845384	-	-
Rat Genome 230 2.0 Array	1369007_PM_at	-	-
Rat Genome 230 2.0 Array	1387410_PM_at	-	-
Rat Genome 230 2.0 Array	1369007_at	-	-
Rat Genome 230 2.0 Array	1387410_at	-	-
Affymetrix HT Rat Focus Array	1369007_PM_at	-	-
Affymetrix HT Rat Focus Array	1387410_at	-	-
Affymetrix HT Rat Focus Array	1369007_at	-	-
Affymetrix HT Rat Focus Array	1387410_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300024288.rn.1	TC0300003140.rn.1	RTA TC
Rat Expression Set 230	1387410_at	-	-
Rat Expression Set 230	1369007_PM_at	-	-
Rat Expression Set 230	1387410_PM_at	-	-
Rat Expression Set 230	1369007_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10845384	-	-
Rat Genome U34 Set	L08595_at	-	-
Rat Genome U34 Set	U01146_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21630440	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355906	-	-
RatRef-12 Expression BeadChip	ILMN_58852	-	-