Rn00571350_m1 Best Coverage

• Gene Symbol: Apom
• Gene Name: apolipoprotein M
• Gene Aliases: -
• Chromosome Location: Chr.20: 5120473 - 5123073 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apom
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019373.2	NP_062246.1	5 - 6	622		84
GenBank mRNA	AF207821.1	-	5 - 6	599		84
	BC089807.1	-	5 - 6	571	7323885	84
	FQ210093.1	-	5 - 6	621		84
	FQ219449.1	-	5 - 6	622		83

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000001106.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apom

Panther Classification:

Molecular Function -

apolipoprotein, transfer/carrier protein

Gene Ontology Categories:

Process(es)

response to glucose
cholesterol efflux
high-density lipoprotein particle remodeling
high-density lipoprotein particle assembly
high-density lipoprotein particle clearance
negative regulation of plasma lipoprotein particle oxidation
lipoprotein metabolic process
reverse cholesterol transport

Function(s)

molecular_function
lipid transporter activity
phospholipid binding
antioxidant activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P023199	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P325560	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P325560	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P325560	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P325560	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10828084	-	-
Affymetrix Rat Gene 1.0 ST Array	10828086	-	-
Affymetrix Rat Gene 1.0 ST Array	10828083	-	-
Affymetrix Rat Gene 1.0 ST Array	10828082	-	-
Affymetrix Rat Gene 1.0 ST Array	10828087	-	-
Affymetrix Rat Gene 1.0 ST Array	10828085	-	-
Affymetrix Rat Gene 1.1 ST Array	10828081	-	-
Rat Genome 230 2.0 Array	1386980_at	-	-
Rat Genome 230 2.0 Array	1386980_PM_at	-	-
Affymetrix HT Rat Focus Array	1386980_at	-	-
Affymetrix HT Rat Focus Array	1386980_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000009262.rn.1	TC2000001106.rn.1	RTA TC
Rat Expression Set 230	1386980_PM_at	-	-
Rat Expression Set 230	1386980_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10828081	-	-
Rat Genome U34 Set	rc_AA893213_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22358269	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365037	-	-
RatRef-12 Expression BeadChip	ILMN_61908	-	-