Rn00571950_s1 Best Coverage

• Gene Symbol: Ccr1
• Gene Name: chemokine (C-C motif) receptor 1
• Gene Aliases: -
• Chromosome Location: Chr.8: 132996646 - 133002201 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ccr1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_020542.2	NP_065417.1	2	1006		96
GenBank mRNA	BC079207.1	-	2	1006	7131790	96

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800003637.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, G-protein coupled receptor, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Rat Chemokine Panel, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ccr1

Gene Ontology Categories:

Process(es)

calcium ion transport
cellular calcium ion homeostasis
exocytosis
inflammatory response
immune response
G-protein coupled receptor signaling pathway
positive regulation of cytosolic calcium ion concentration
cell-cell signaling
metabolic process
negative regulation of gene expression
cerebellum development
myeloid cell differentiation
negative regulation of bone mineralization
leukocyte chemotaxis
positive regulation of osteoclast differentiation
negative regulation of innate immune response
positive regulation of calcium ion transport
chemokine-mediated signaling pathway
positive regulation of ERK1 and ERK2 cascade
positive regulation of monocyte chemotaxis

Function(s)

phosphatidylinositol phospholipase C activity
chemokine receptor activity
C-C chemokine receptor activity
C-C chemokine binding
chemokine (C-C motif) ligand 7 binding
chemokine (C-C motif) ligand 5 binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P358235	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	467414	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	640137	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	955034	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	476690	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	703580	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	289044	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	34567	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	687954	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	59997	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	440	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	109471	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	46380	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	83062	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P358235	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P358235	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P358235	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P358235	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10921165	-	-
Affymetrix Rat Gene 1.0 ST Array	10921164	-	-
Affymetrix Rat Gene 1.1 ST Array	10921163	-	-
Rat Genome 230 2.0 Array	1370083_at	-	-
Rat Genome 230 2.0 Array	1370083_PM_at	-	-
Affymetrix HT Rat Focus Array	1370083_PM_at	-	-
Affymetrix HT Rat Focus Array	1370083_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800029566.rn.1	TC0800003637.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800029565.rn.1	TC0800003637.rn.1	RTA TC
Rat Expression Set 230	1370083_at	-	-
Rat Expression Set 230	1370083_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10921163	-	-
Rat Genome U34 Set	E13732cds_at	-	-
Rat Genome U34 Set	E13732cds_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21140206	-	-
ABI Rat Genome Survey Microarray	21432224	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1356721	-	-
RatRef-12 Expression BeadChip	ILMN_49305	-	-