Rn00572482_m1 Best Coverage

• Gene Symbol: Twist2
• Gene Name: twist family bHLH transcription factor 2
• Gene Aliases: Dermo1
• Chromosome Location: Chr.9: 98924134 - 98968510 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Twist2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021691.2	NP_067723.1	1 - 2	521		83
GenBank mRNA	BF550979.1	-	1 - 2	214		83
	Y08139.1	-	1 - 2	521		83

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900001143.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Twist2

Panther Classification:

Molecular Function -

basic helix-loop-helix transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
osteoblast differentiation
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
negative regulation of cell proliferation
positive regulation of keratinocyte proliferation
negative regulation of tumor necrosis factor production
negative regulation of apoptotic process
negative regulation of DNA binding
negative regulation of molecular function
negative regulation of myeloid cell differentiation
negative regulation of osteoblast differentiation
negative regulation of transcription, DNA-templated
embryonic cranial skeleton morphogenesis
face morphogenesis
cornea development in camera-type eye

Function(s)

transcription factor activity, RNA polymerase II transcription factor binding
molecular_function
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
protein domain specific binding
protein dimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P131477	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	82889	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	12855	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	478101	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	104971	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	929805	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	291072	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	836508	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	575920	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	130564	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	888677	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	510688	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	669664	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	214162	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	877423	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	883236	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	970326	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	234900	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	449818	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	274137	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	798163	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	419493	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	844225	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	459771	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	896934	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	766639	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	891352	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	454036	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	15902	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	306957	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	948691	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	216697	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	62368	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	128445	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	120194	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	46163	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	56917	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	148003	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P131477	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P131477	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P131477	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P381599	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P407132	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	45744	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	42784	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	36901	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10925450	-	-
Affymetrix Rat Gene 1.0 ST Array	10925451	-	-
Affymetrix Rat Gene 1.1 ST Array	10925449	-	-
Rat Genome 230 2.0 Array	1369685_PM_at	-	-
Rat Genome 230 2.0 Array	1369685_at	-	-
Affymetrix HT Rat Focus Array	1369685_at	-	-
Affymetrix HT Rat Focus Array	1369685_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0900009957.rn.1	TC0900001143.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900009958.rn.1	TC0900001143.rn.1	RTA TC
Rat Expression Set 230	1369685_at	-	-
Rat Expression Set 230	1369685_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10925449	-	-
Rat Genome U34 Set	Y08139_at	-	-
Rat Genome U34 Set	rc_AI045628_at	-	-
Rat Genome U34 Set	rc_AI030876_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21180962	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1374827	-	-
RatRef-12 Expression BeadChip	ILMN_58331	-	-