Rn00572531_s1 Best Coverage

• Gene Symbol: Synpo
• Gene Name: synaptopodin
• Gene Aliases: -
• Chromosome Location: Chr.18: 55870720 - 55891710 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Synpo
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021695.2	NP_067727.2	2	1928		88
GenBank mRNA	AB013130.1	-	1	1454		88
	AM980944.1	-		1398		88
	DY313339.1	-	1	546		88
	EV779156.1	-	1	307		88

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Synpo

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

positive regulation of actin filament bundle assembly
regulation of stress fiber assembly

Function(s)

actin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P553885	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	8625	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	779415	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	326990	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	822809	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	220411	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	70980	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	933782	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	495588	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	791233	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	17874	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	659769	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	446516	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	48934	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	376533	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	448052	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	295868	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	157637	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P553885	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P553885	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P553885	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P553885	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	36787	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	63243	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10804578	-	-
Affymetrix Rat Gene 1.0 ST Array	10804577	-	-
Affymetrix Rat Gene 1.0 ST Array	10804575	-	-
Affymetrix Rat Gene 1.0 ST Array	10804579	-	-
Affymetrix Rat Gene 1.0 ST Array	10804580	-	-
Affymetrix Rat Gene 1.1 ST Array	10804567	-	-
Rat Genome 230 2.0 Array	1387501_PM_at	-	-
Rat Genome 230 2.0 Array	1387501_at	-	-
Affymetrix HT Rat Focus Array	1387501_at	-	-
Affymetrix HT Rat Focus Array	1387501_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1800010552.rn.1	TC1800001497.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800010553.rn.1	TC1800001497.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800010558.rn.1	TC1800001497.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1800010551.rn.1	TC1800001497.rn.1	RTA TC
Rat Expression Set 230	1387501_at	-	-
Rat Expression Set 230	1387501_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10804567	-	-
Rat Genome U34 Set	AB013130_at	-	-
Rat Genome U34 Set	AB013130_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20968338	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1368169	-	-
RatRef-12 Expression BeadChip	ILMN_59961	-	-