Rn00573188_m1 Best Coverage

• Gene Symbol: Batf3
• Gene Name: basic leucine zipper transcription factor, ATF-like 3
• Gene Aliases: Jdp1
• Chromosome Location: Chr.13: 109713376 - 109725126 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Batf3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021865.1	NP_068637.1	2 - 3	170		68
	XM_008769873.1	XP_008768095.1	2 - 3	282		68
	XM_008769874.1	XP_008768096.1	2 - 3	310		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300001042.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Batf3

Panther Classification:

Molecular Function -

basic leucine zipper transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
response to virus
myeloid dendritic cell differentiation
dendritic cell differentiation

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
sequence-specific DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P066841	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	921824	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	78821	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	752030	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	822302	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	457648	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	810400	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	46564	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P066841	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P066841	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P066841	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P262382	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10766719	-	-
Affymetrix Rat Gene 1.0 ST Array	10766721	-	-
Affymetrix Rat Gene 1.0 ST Array	10766720	-	-
Affymetrix Rat Gene 1.1 ST Array	10766718	-	-
Rat Genome 230 2.0 Array	1369891_PM_at	-	-
Rat Genome 230 2.0 Array	1369891_at	-	-
Affymetrix HT Rat Focus Array	1369891_PM_at	-	-
Affymetrix HT Rat Focus Array	1369891_at	-	-
Affymetrix Rat Clariom S Assay	PSR1300007461.rn.1	TC1300001042.rn.1	RTA TC
Rat Expression Set 230	1369891_PM_at	-	-
Rat Expression Set 230	1369891_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10766718	-	-
Rat Genome U34 Set	U53450cds_at	-	-
Rat Genome U34 Set	U53450cds_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22075012	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1359391	-	-
RatRef-12 Expression BeadChip	ILMN_60648	-	-